1IPA


Conserved Protein Domain Family
SpoU_sub_bind

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pfam08032: SpoU_sub_bind 
RNA 2'-O ribose methyltransferase substrate binding
This domain is a RNA 2'-O ribose methyltransferase substrate binding domain.
Statistics
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PSSM-Id: 400401
View PSSM: pfam08032
Aligned: 95 rows
Threshold Bit Score: 44.9159
Threshold Setting Gi: 81790698
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1IPA_A  30 LIEGAREIERALQA---G-IE---LEQA-LVWEGGLNPEEQQVYAALgRVG-RLALLEVSEAVLKKLSv-RDNPAGLIAL 99 
Q6A7V4  41 LVEGAQAVREALAW-----PG---KVNL-LATSDPARDA--EHVEVA-TCR-GVRVVVLTDEDVNALSd-TVTSQGIFAV 106 Cutibacterium acnes
Q6AGD8  38 LLEGPQAVAEALAF---R-SEl--LVEL-YATPTALERH-QDIAQAA-AAA-GTQVEFVTEQVLGTIAd-TVTPQGFVAV 106 Leifsonia xyli subsp....
Q828C9  57 LAEGPQAVREAAAH---RaADaatLVEL-FATAE-AAERYADIIGEA-RDA-GARVHLADEAVIADISt-TVTPQGLVGI 128 Streptomyces avermitilis
P74261  38 LLEGTHLLEVALAQg-kG-FNhgcFTAM-WQEKN-------PVLADR-LMAqSVHSYLVSGEVLAKMAs-TVNPDGVVAT 105 Synechocystis sp. PCC...
Q8Z0C3  42 LLEGTHLLEEACAM---D-YP---LEVV-CCTPEWEANH-TALWDDA-CSR-CDRYEIVSEEVLQAIAt-TVQPDGVVAT 109 Nostoc sp. PCC 7120
Q7NN60  29 LVEGTHPVAAALAG---GwELefvCATEaWVGEH------PAMHTAL-SGR-AGRYETVAPAVIEALAd-TVHPSGVVAA 96  Gloeobacter violaceus
Q9VW14 141 IVEGRRLIQEALQC---G-LK---MEVL-LFSQKDQLALvkEEVGVA-QVEtGTKIYKVPQHDLKTWSs-LVTPPGLMAI 210 fruit fly
Q9A907  33 LAEGLKIVIEAIDC---GhAP---KIVM-YGPDAADHPMLKKAVAAC-LKA-GGEVIEVNREILEKVSr-RDNPQAVVAV 102 Caulobacter vibrioides
Q8KBA1  33 LAEGLRTVSELLQSlsdP-SM---LHAL-VFDEKAAGQLDGLERFAG-------KAWLAGPNEFKRLAqtTSP-QGVVAA 99  Chlorobaculum tepidum
1IPA_A 100 ARMPE 104
Q6A7V4 107 CRQVT 111 Cutibacterium acnes
Q6AGD8 107 ARQFP 111 Leifsonia xyli subsp. xyli
Q828C9 129 CRFLD 133 Streptomyces avermitilis
P74261 106 LTMDQ 110 Synechocystis sp. PCC 6803 substr. Kazusa
Q8Z0C3 110 AKRSE 114 Nostoc sp. PCC 7120
Q7NN60  97 VRRRA 101 Gloeobacter violaceus
Q9VW14 211 FDRPS 215 fruit fly
Q9A907 103 FKQVF 107 Caulobacter vibrioides
Q8KBA1 100 FRKPE 104 Chlorobaculum tepidum
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