Conserved Protein Domain Family
Alpha-amyl_C2

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pfam07821: Alpha-amyl_C2 
Alpha-amylase C-terminal beta-sheet domain
This domain is organized as a five-stranded anti-parallel beta-sheet. It is the probable result of a decay of the common-fold.
Statistics
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PSSM-Id: 400259
View PSSM: pfam07821
Aligned: 62 rows
Threshold Bit Score: 64.1143
Threshold Setting Gi: 144581794
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
jgi:OSTLU_18258   423 RTGLSSNaAAVHIE--RATAGLYAAHIghaqemyteglsmdvdvkRPSICMKLGVE-----DWSPNaakvgNLSWKCTAS 495 Ostreococc...
WP_015926959      411 vAGVHAG-SAVHPQdnARSANVYAARVeg---------------rNGDLYVRIGGSd---tDWQPSrs--gYRDYREYAR 469 Methylobac...
CCX44549          359 ACGVSNT-SKVDVI--KSETGCYVAKIyg---------------sKGTLGVRIGWTtdydnTFSS---------FTKVAS 411 Prevotella...
NP_001241207      356 RQGIQSR-SSVRIL--EAKHDLYSAVI------------------GEKVCMKIGNG-----SWCPt-----GREWTLSTS 404 soybean
ERM96300          272 QQGIYSR-SPIRIL--EAHHNLYCAMI------------------GDEVCMKIGDG-----LWCPs-----GREWKLATS 320 Amborella ...
Q08YD2            361 SKGVHSS-SAVSIQ--VADSSRYAALItg---------------tSGTLAMKLGPG-----DWSPs-----GSGWTLATS 412 Stigmatell...
MPITM:COCOR_02752 361 NAGLTSE-STVSIQ--RAESGLYAAII------------------GGKVAVKLGSG-----SWTP------GTGWTQAAS 408 Corallococ...
WP_012488704      355 AQGITST-SSVSIA--AATTGLYAAVI------------------DGKVAMKIGPN-----AWSPs-----GTGWTLAAS 403 Cellvibrio...
Q21NA2            358 SEGLTST-SSVDIK--AAQNGLYAAVI------------------DGKVAVKIGPN-----SWAPs-----GANWELKAS 406 Saccharoph...
jgi:Spith_1658    379 EKGITST-SSIDVL--AADSGKYVARI------------------DDVLIVKIGPDl----SYNPS------SEWTLTAY 427 Spirochaet...
jgi:OSTLU_18258   496 GDGWAIWE 503 Ostreococcus lucimarinus CCE9901
WP_015926959      470 GAGWTVWv 477 Methylobacterium nodulans
CCX44549          412 GTQYSMWM 419 Prevotella sp. CAG:1031
NP_001241207      405 GHNYAVWH 412 soybean
ERM96300          321 GHRYAVWH 328 Amborella trichopoda
Q08YD2            413 GNNYAVWT 420 Stigmatella aurantiaca DW4/3-1
MPITM:COCOR_02752 409 GTDYTVWT 416 Corallococcus coralloides DSM 2259
WP_012488704      404 GTNYAVWT 411 Cellvibrio japonicus
Q21NA2            407 GTNYAVWv 414 Saccharophagus degradans 2-40
jgi:Spith_1658    428 GNDWAVWT 435 Spirochaeta thermophila DSM 6578
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