5KXF


Conserved Protein Domain Family
SPOC

?
pfam07744: SPOC 
Click on image for an interactive view with Cn3D
SPOC domain
The SPOC (Spen paralogue and orthologue C-terminal) domain is involved in developmental signalling.
Statistics
?
PSSM-Id: 400205
View PSSM: pfam07744
Aligned: 52 rows
Threshold Bit Score: 61.9851
Threshold Setting Gi: 122061576
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
5KXF_A         24 GPPDSDHIWRGXIAKGGtPVCCARCVPXGKGIETklp---evVNCSARTDLNXLAkhYAVAI--------GCEIVFFV-P 91   thale cress
XP_017175994  680 NAPPSPPPWEGSLDMFSiKHFRAKAQLISGHSCQlvqalpdvIRSAGRLPPSHVWdlLDSMGpsk---akDICVIRLC-P 755  house mouse
Q6ZMY3        859 KALPCLPPWEGVLDMFSiKRFRARAQLVSGHScrlvqalptvIRSAGCIPSNIVWdlLASICpak---akDVCVVRLC-P 934  human
Q4S5L1       2508 FLAKQEILWKGFINMLTvAKFVSKAYLVSGSAENlkadlpdtIQIGGRILPETVWdyMEKVKisatkataDVVLVWL--P 2585 spotted green...
XP_001418938  273 DVPLPEGAWEGTVDVPGlPTLQLRAVPIGGEGAHvgdilpesLHIKGRVDYKAMQsfVKQVHrss--tsrAVTLVHISsA 350  Ostreococcus ...
Q7XTM7        243 SPSAYESLCDGTIQLSStVKVSVIAFFKSGEKNHditw-pkiIEIKGRVKLDVFEkfVQELRrcq---trSLMVISLCwK 318  Japanese rice
Q0E2W4        676 LPMIRESIWEGAIQLTMsSLTNVVAIFKSGEKPPvkew-rsfVEIKGRVKLSAFQefVEQLPksr---srAIMVTELCwK 751  Japanese rice
CAN64736      617 DQKKGDYVWEGLLQLNVsSMATVVCFFKSGEKAStkew-pgfLEIKGRVRLDAFEkfLQELPmsr---srATMVVRFAwK 692  wine grape
Q9LYE6        534 SDDKGERAWDGILQLSMsSVVPVAGIFKSGEKAEtsew-pamVEVKGRVRLSGFGkfIQELPksr---trALMVMYLAyK 609  thale cress
Q682K2        591 FIPDGERLWEGVLQLSPsTVSSVIGILRSGERTTtkew-pilLEIKGRVRLDAFEkfVRELPnsr---srAVMVMCFVcK 666  thale cress
5KXF_A         92 --DREEDFASYTEFLRYLSSKDRAGVaklddgTTLFLVPP---------SDFLTDVLqvtr------------------- 141  thale cress
XP_017175994  756 --HGSRDIQNYRLLYSYLNNKQCHCLatv-qqVKMVLLPLpa------fEPLPARLRplggpgl-------------eit 813  house mouse
Q6ZMY3        935 --HGARDTQNCRLLYSYLNDRQRHGLasv-ehMGMVLLPLpa------fQPLPTRLRplggpglwalpvspllspglevt 1005 human
Q4S5L1       2586 -------------VATVLS-------------KIYTLCPLvqmslfhpcCNLLkvqv----------------------- 2616 spotted green...
XP_001418938  351 psGGDDAEAAMAKIVKQYRERKRCGVaktedgIELYLAPRgqha--dkvILTVDLIPghvp------------------- 409  Ostreococcus ...
Q7XTM7        319 fgTSKAGLLGMKEVAENFEASQKVGFadvcdgSNLYVCPRsd--------aVITILAkcgffkgms----------aadt 380  Japanese rice
Q0E2W4        752 egSHESGRQHLLQTIDSYISDERVGLaepadgIELYLCPSqg--------kTVEILSrhlpkehle----------slav 813  Japanese rice
CAN64736      693 egSSEDGRANLCEVADSYVLDERVGFaepapgMELYFCPPht--------xTLEMISkhlykdqte----------tlns 754  wine grape
Q9LYE6        610 dgISESQRGSLIEVIDSYVADQRVGYaepasgVELYLCPTrg--------eTLDLLNkvisqeqld----------evks 671  thale cress
Q682K2        667 eeCSKAEQENISEVVDSYAKDGRVGYaepasgVELYLCPTrg--------rTVEILNkivprnqld---------flksi 729  thale cress
5KXF_A        142 -qerLYGVVLKL 152  thale cress
XP_017175994  814 htslLLAVLFPK 825  house mouse
Q6ZMY3       1006 hsslLLAVLLPK 1017 human
Q4S5L1       2617 -agtMVDPIVQQ 2627 spotted green pufferfish
XP_001418938  410 pstgMIGMVIHP 421  Ostreococcus lucimarinus CCE9901
Q7XTM7        381 nqdsLIGCIVWR 392  Japanese rice
Q0E2W4        814 sassIIGVIVWR 825  Japanese rice
CAN64736      755 tdngLIGVVVWR 766  wine grape
Q9LYE6        672 ldigLVGVVVWR 683  thale cress
Q682K2        730 nddgLIGVVVWR 741  thale cress
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap