5LEW


Conserved Protein Domain Family
DNA_pol3_alpha

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pfam07733: DNA_pol3_alpha 
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Bacterial DNA polymerase III alpha subunit
Statistics
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PSSM-Id: 400196
View PSSM: pfam07733
Aligned: 88 rows
Threshold Bit Score: 226.615
Threshold Setting Gi: 81834152
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5LEW_A  313 SWLRHEVDAGLRRRFPAGpPDGYRERAAYEIDVICSKGFPSYFLIVADLISYARSAGIRVGPgRGSAAGSLVAYALGITD 392  Mycobacterium tuber...
P13267  824 EEIREMSYQRARSIYGEElPEIVEARIEKELKSIIGHGFAVIYLISHKLVKRSLDDGYLVGS-RGSVGSSLVATLTEITE 902  Bacillus subtilis s...
Q831W8  829 QEITDLSYNRARELYGDPlPEIVEKRLEKELNSINGNGFSVIYLISQKLVHKSNEDGYLVGS-RGSVGSSFVATMTGITE 907  Enterococcus faecalis
Q8DWE0  838 EKVAEMTYEKAFEIYGNPlPDIIDLRIEKELTSILGNGFAVIYLASQMLVNRSNERGYLVGS-RGSVGSSFVATMIGITE 916  Streptococcus mutan...
Q9CDT7 1015 ERIVRLTYEKAHEWYGNPlPDIIDARLEKELRSILGNGFSVVYIISQELVKRSNDRGYIVGS-RGSVGSSLVATMIGITE 1093 Lactococcus lactis ...
Q88VK2  824 AEIEKLTMDRAHAWYGNPlPEIVQKRVDKELKSIIGNGFSVIYLIAQRLVFKSNKDGYLVGS-RGSVGSSIVATLSGITE 902  Lactobacillus plant...
Q97DN0  831 QTIKDIAYEKAHELYGDPlPEIVQQRLDKELESIIKNGFSVMYIIAQKLVWKSNEDGYLVGS-RGSVGSSFVANMTGITE 909  Clostridium acetobu...
Q8RA32  788 EELRRITLEKAHEIYGDPlPPIVQERLDRELNAIINNGYAVMYVIAQKLVSKSLQDGYLVGS-RGSVGSSLVATMSGITE 866  Caldanaerobacter su...
Q8XJR3  835 EEIRNMTMNKVHSIYGENlPEVVQKRLDKELNSIINNGYAVLYLIAQKLVAKSLEDGYLVGS-RGSVGSSFVATMSDITE 913  Clostridium perfrin...
Q9PQB4  820 QKTIDYVYHTAKKIYGENlPTIVEQRIKKELNSIIKHGFSVVYWISHLLVEKSMQDGYGVGS-RGSVGSSLVATFLNITD 898  Ureaplasma parvum s...
5LEW_A  393 IDPI----------------------------------------P---HGLLFERFLNPERTSMPDIDIDFDDRRRGEMV 429  Mycobacterium tuber...
P13267  903 VNPLpphyvcpecqhseffndgs--vgsgfdlpdktcphcgtplKkdgHDIPFETFLGFKGDKVPDIDLNFSGEYQPQAH 980  Bacillus subtilis s...
Q831W8  908 VNPLaphyycpecqysefyedgs--ygsgfdmpekacpkcgarlFkdgHDIPFETFLGFHGDKVPDIDLNFSGDYQAEAH 985  Enterococcus faecalis
Q8DWE0  917 VNPMpphyicpnpdckhsefitdgsvgsgydlpdkicsecgtpyKkdgQDIPFETFLGFDGDKVPDIDLNFSGDDQPSAH 996  Streptococcus mutan...
Q9CDT7 1094 VNPLaphyrcpecqyfecyddgs--fgsgydmpdkncpkcdhklIkdgHDIPFETFLGFKGDKVPDIDLNFSGDDQPLAH 1171 Lactococcus lactis ...
Q88VK2  903 VNPMpphyrcpncqyshfytnne--ygsgydlppkdcpecgtdmVrdgQNIPFETFLGFYGNKVPDIDLNFSGDYQPIAH 980  Lactobacillus plant...
Q97DN0  910 VNSLpphyrcpkckysdfsdygv---kngfdlpdktcpvcgeplTkdgIDIPFETFLGFNGDKEPDIDLNFSGEYQAKAH 986  Clostridium acetobu...
Q8RA32  867 VNPLpphyvcpkckhsefvtdgs--fgcgvdmpdkycpncgtlmKkdgFDIPFEVFMGFEGDKEPDIDLNFSGEYQPIAH 944  Caldanaerobacter su...
Q8XJR3  914 VNGLpphyvcpnckkseffldgs--issgadlpdkncpdcgakyIkdgHDIPFETFLGFEGDKEPDIDLNFSGEYQAVVH 991  Clostridium perfrin...
Q9PQB4  899 VNPLtphylcpnckkcefitna----ddgfdlapksceqcqtpmLtdgHNIPFETFLGFDGDKVPDIDLNFSGVYQAVAH 974  Ureaplasma parvum s...
5LEW_A  430 RYAADKWGHDRVAQVITFGTIKTKAALKDSARIhYGQPgfaiadritkalppaimakdiplSGITDPsherykeaAEVRG 509  Mycobacterium tuber...
P13267  981 NYTKVLFGEDNVYRAGTIGTVAEKTA--------YGYV-----------------------KGYAGD-----------NN 1018 Bacillus subtilis s...
Q831W8  986 NYTKVLFGEEYVYRAGTIGTVADKTA--------YGFV-----------------------KGYERD-----------HN 1023 Enterococcus faecalis
Q8DWE0  997 LDVRDIFGEEYAFRAGTVGTVADRTA--------YGFV------------------------KGYE---------RDYGK 1035 Streptococcus mutan...
Q9CDT7 1172 LDVRDIFGEDYAFRAGTIGTVAEKTA--------FGFV------------------------KGYE---------RDYDQ 1210 Lactococcus lactis ...
Q88VK2  981 NYTKVLFGEKNVYRAGTIGTVADKTG--------YGYV------------------------KAYER--------DTNQT 1020 Lactobacillus plant...
Q97DN0  987 RYTEVIFGKGTTFKAGTIGTIAEKTA--------FGYV-----------------------KKYYEE-----------KS 1024 Clostridium acetobu...
Q8RA32  945 RYTEELFGKGHVFRAGTIGTLADKTA--------YGYV-----------------------KKYFEE-----------RN 982  Caldanaerobacter su...
Q8XJR3  992 KYTEVLFGKGYVFKAGTIGTVAEKTA--------YGFV-----------------------KKYLQE-----------RG 1029 Clostridium perfrin...
Q9PQB4  975 NFIKSIFGETHSYRAGTIGTMAQTSAENTVKKY-F--------------------------ENRFNE--------NKII- 1018 Ureaplasma parvum s...
5LEW_A  510 LIETDPDVRTIyqTARGLEGLIRNAGVHACAVIMSSE--PLTEAIPLWKr-pQDGA--IITGWDYPACEAiGLLKMDFLG 584  Mycobacterium tuber...
P13267 1019 LHMRGAEIDRL---VQGCTGVKRTTGQHPGGIIVVPDymDIYDFSPIQFpadATGSewKTTHFDFHSIHD-NLLKLDILG 1094 Bacillus subtilis s...
Q831W8 1024 LHLRGAEIDRL---AKGSTGVKRTTGQHPGGIIVIPDymDVYDFTPIQYpadDQEAewKTTHFDFHSIHD-NILKLDILG 1099 Enterococcus faecalis
Q8DWE0 1036 FY-RDAEVDRL---AQGSAGVKRTTGQHPGGIVVIPNymDVYDFTPVQYpadDLTAewQTTHFNFHDIDE-NVLKLDVLG 1110 Streptococcus mutan...
Q9CDT7 1211 FY-GNAEIDRL---AAGSTGVKRTTGQHPGGIIVIPNymDVYDFSPVQFpadDVNAewQTTHFDFHAIHD-NILKLDILG 1285 Lactococcus lactis ...
Q88VK2 1021 L--RSAEVDR---LAKGTTGVKRTTGQHPAGIIVVPDymDIYDFTPVQYpadDQSAawQTTHFDFHSIHD-NILKIDILG 1094 Lactobacillus plant...
Q97DN0 1025 IPVNKAEIIRI---SRGCTGIKRTTGQHPGGIIVVPKgrEIFEFCPVQHpadDPNSdiITTHFDYHSIDQ-NLLKLDILG 1100 Clostridium acetobu...
Q8RA32  983 LTVHKSEIKRL---TMGCTGIKRTTGQHPGGVMVVPKdkSIYDFTPIQRpadAEDTdvITTHFDYHSLSG-KLLKLDILG 1058 Caldanaerobacter su...
Q8XJR3 1030 LVVSQAEIERL---TIGCTGIKRTSGQHPGGIMVVPNdnEIYNFCPIQHpadDVNTdiITTHFDYHSISG-RLLKLDILG 1105 Clostridium perfrin...
Q9PQB4 1019 ---RDSTVSL---YVQKCIDSKRTTGQHPGGIIIVPKeySIWDFSPYNFpanDINEtwKTTHFAFEYLHD-SLLKFDILG 1091 Ureaplasma parvum s...
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