Conserved Protein Domain Family

pfam07676: PD40 
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WD40-like Beta Propeller Repeat
This family appears to be related to the pfam00400 repeat This This repeat corresponds to the RIVW repeat identified in cell surface proteins [Adindla et al. Comparative and Functional Genomics 2004; 5:2-16].
PSSM-Id: 400148
View PSSM: pfam07676
Aligned: 94 rows
Threshold Bit Score: 28.6401
Threshold Setting Gi: 75540335
Created: 11-May-2020
Updated: 7-Aug-2020
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
Format: Row Display: Color Bits: Type Selection:
2OJH_A  122 PRLXTKNLP-----SYWHGWSPDGKSFTYCGIRD------QVFD---IYS 157  Agrobacterium fabrum str. C58
Q82TV9  173 LPSINTPTGe----EHCPIIVSDS-LIYFNYSQP------GVTQesdIWK 211  Nitrosomonas europaea
Q8F9Y1  228 LGSPLNSSEs----EILPFIHQDGEQLYFSSNREd-----ERKKf-kIFR 267  Leptospira interrogans
Q8EY80  213 LPDPINTVYs----EIAATISKDGKTIYFSSNRPgg---fGGYD---LYK 252  Leptospira interrogans
Q8EY80   48 LKGSINTSLn----EFGISLTDDGNILYFYSKRQn----sNYTD---IYK 86   Leptospira interrogans
Q8F9Y1  310 LPKPFNTDKwegfdNEGISFDKDGIWAYISSNRSgg---eGQFD---IFR 353  Leptospira interrogans
Q82TV9   47 MGAPINSSGs----EIEITYSADGKTAIFVSTRAgsvespGTPYnfdIWM 92   Nitrosomonas europaea
Q82TV9  225 LGAKINSPQrd--hMHWTGVSKDGKSMVITSTRIdpd-srGGHD---MWI 268  Nitrosomonas europaea
Q7MFH6  531 KPLQITNTGf---iEGEPKFSHDGQMIYWSTDRNs----lRDID---KWA 570  Vibrio vulnificus YJ016
Q82TV9  114 VGPNINTTAw----ELEPSFSDDGNVIYFTRYEP------GNLLsgdLYV 153  Nitrosomonas europaea
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