Conserved Protein Domain Family
PSD1

?
pfam07587: PSD1 
Protein of unknown function (DUF1553)
A family of proteins found in Rhodopirellula baltica.
Statistics
?
PSSM-Id: 429553
Aligned: 191 rows
Threshold Bit Score: 135.698
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
WP_012913190          575 TREPLMHWLRSKENPYFAKAFVNRVWANYFNVGIVQPPDDLSLANPPSNKPLLDYLAQGFIEHNFDMKWLHREILSSRTY 654  Pirel...
instpast:LEPBI_I0160  325 RRKIFASWLTDKSNDRSRKVIINRVWTELMGWSFFTPLDDWNEDTVVQGEEILNHLDAYFLANKLKIKELILYIVTSNAY 404 
WP_012909303          787 TREQLAVRITSPHNTRFAKVLANRFWHRYIGRGIIEPVDDWEQGDN-VHPELLEFLARKLIESGYDAKSLARLILNSDTY 865  Pirel...
WP_013110348          838 RREQLAVLVTSPANRRFADVIVNRLWQRYLGKGIVEPIDDWETPDP-THPQVLSILEQELIASGYELKQIARVILNTEVY 916  Planc...
jgi:Plabr_2898        789 SRTTLAELVTSPRNERFAQVIANRVWKRLIGRGIVEPVEDWETGEP-SHPELMKWLGRKFVEQGYDLKELTRTIVSSDLY 867 
Q7UTM0                921 ARERLAVAVTTPENPRFAKVIVNRVWQRLIGTGFVEPLGDWEKASP-SHPELLEWLSRDFIASGYDFRKLVRTVMQSEVY 999  Pirel...
WP_013630516          922 SREQLAAYITSPQNARFAEVIVNRVWRRLIGTGLIDSPHDWEGKAA-SHPELLQWLANDFISHNYDLKHLARRILTSQLY 1000 Rubin...
jgi:Sinac_0433        658 PRDRLAALITGPGNERFAQVIANRAWKRLMGRGLVDPVDDWEKGSP-SHPELLRHLGRELVRGEFDLKRLVRLILNSHAY 736 
Q7UPP5                374 PREQFAAWVTSPENPRFSQTVVNRLWKRLMGVGFVDPVDDFRDENPCVNEAAMDYLCKELVRRGFDLKELTRIVLYSQTY 453  Pirel...
WP_013628368          338 PRVVMARWMTSRENPRFTKTIVNRLWKRAFGVGLIEPVDDMRDDTVASNPELMDFLISEMHRLNFDMKEFMRIVYNTKTY 417  Rubin...
WP_012913190          655 -QLSWQ--TNETNAKDERNFARAVPRRLPAEVAYDALITATasdtkaas------------------------------- 700  Pirel...
instpast:LEPBI_I0160  405 gRTVTK--QTANLDP----IRYFSPQRLDSDQLLNSLIRVSdlqkl---------------------------------- 444 
WP_012909303          866 -QREPTssL-----AQSRLFAAPMRRRMTAEQVLDSMYSVAgkrlnveelnidvdgtrneaqs-------------islg 926  Pirel...
WP_013110348          917 -QRKSDhsVYs-dARRARLFAGPAPRKLTAEQLVDSLFVASgksfrteelnidvdglrpmnqs-------------lgfg 981  Planc...
jgi:Plabr_2898        868 -QQKVVteF-----EQEQFFAGPTRRRMTAEQLVDTVYMAVgkplpcepltynadgrqsasvf-------------nnfg 928 
Q7UTM0               1000 -QREAIgqNDp-vNPANRFFAAPDRRRMSSEQIIDSMVMSSgrpldvepltfdpearrppqtm-------------ihld 1064 Pirel...
WP_013630516         1001 -QRETRpkAKt-vTPETQFFLAPDQRRMTAEQLVDSLHVSVgkpmdveeitfapeggarsqyr-------------qtlg 1065 Rubin...
jgi:Sinac_0433        737 -QRGSDlaL----TETDPHFAARAQRRLSAEQIVDSLFQATgkpfeteevnldldgrravans-------------inlg 798 
Q7UPP5                454 -QRKAV--DYDITDGDLYYFPGPTVRRMTAEQVWDSILTLAvdnpwpfqrptakemkpvmdldfskvdfeevqrrsakfk 530  Pirel...
WP_013628368          418 -QRQSS--PEEFDPAEPYHFPGPVLRRMSPEQVWDSFITLAledpnkfqrepaelqasllkvdlasvda-mevyerdkal 493  Rubin...
WP_012913190          701 ----------mltelkgRATAIP----GAS------------------------ARSNNnpagfALQVFGrSIRESNCDC 742  Pirel...
instpast:LEPBI_I0160  445 ------------gnireRNLSFFtnliGQKpydltgtgkiripldnlkeftnavEVERPapyhsILAVFG--------SG 504 
WP_012909303          927 ipdrgwqftslsnerdrPSLSLP----GAQ------------------------NMIN------VLEAFGwRGSRQDPMT 972  Pirel...
WP_013110348          982 fperawefvatnnerdrPSLALP----GVQ------------------------SFIN------VLETFGwRASRPDPQS 1027 Planc...
jgi:Plabr_2898        929 vpkrawewvaisnererPSMNLP----KAQ------------------------SVAD------LLAAFGwRSERQDPTT 974 
Q7UTM0               1065 aperawefttlsnerdrPSLAFP----RAG------------------------VIVD------VMKTFGwTGSRQSAID 1110 Pirel...
WP_013630516         1066 kpnrawmfanlanerdrPSLSLP----RAR------------------------AIAD------VMEAFGwDGARQSPRT 1111 Rubin...
jgi:Sinac_0433        799 kprrawqlastsnerdrPSLALP----RVQ------------------------AVVD------VLEAFGwRPSRQDALT 844 
Q7UPP5                531 etyfastykrnlnqhayQRNVLC----RAS------------------------ELPAPlpadhFLRQFG-QGDREVING 581  Pirel...
WP_013628368          494 rqvtgkyryarekqfkhQGLLLV----RAS------------------------ELPQPlppshFLRQFG-QSDRETIEG 544  Rubin...
WP_012913190          743 DR------SMESSLLQTVYLQNDTSVLaaiegardswiEQLSKTSKK--LtdgsEVKAeeaskelarmkvrldrakkadd 814  Pirel...
instpast:LEPBI_I0160  505 QRvdiaddISELTIEQMLTLMNGRVVG-----------KLVWDFGNNqsLvkaeFDQTks-------------------- 553 
WP_012909303          973 MR------ESEPAVIQPATLANGVAAK-----------RIAQLSEDSrfTllalEDQPi--------------------- 1014 Pirel...
WP_013110348         1028 LR------SQETTVLQPATLANGTLTL-----------RASQLSDDSliTelaiSSKSv--------------------- 1069 Planc...
jgi:Plabr_2898        975 VR------ELTPTPLTPLALANGAALN-----------RAVDVSDRGelVdlclSADSv--------------------- 1016
Q7UTM0               1111 RR------DEDPNVLQPGAVGNSVFAS-----------WTVAASEDSelAdlavQSETp--------------------- 1152 Pirel...
WP_013630516         1112 DR------ETDPNVLQPGVLQNSDALV-----------LITRTTRQSglAelamQAKTp--------------------- 1153 Rubin...
jgi:Sinac_0433        845 TR------DSSPNLIQPAVLANGTMGV-----------WLTRLSDDHgiTqlalEDQPl--------------------- 886 
Q7UPP5                582 SQ------DEATVP-QILAMFNGPITHvmlepgsalvdNVLEVNNVK--------------------------------- 621  Pirel...
WP_013628368          545 NS------DGGSVP-QILQMFNGPLTHllldkksflvvNVTNQKDLE--------------------------------- 584  Rubin...
WP_012913190          815 ekqverieeriaelkkllpakegdksdaaplvlkpeEVVRQVYLRTVSRPPTDEEMKRCLQFI 877  Pirellula staleyi
instpast:LEPBI_I0160  554 ----------------------------------mnQVIQNVYFRLLGRFPTNGEWEKIKSYq 582 
WP_012909303         1015 -----------------------------------eKFVEQVFVEMLARKPTAAESAIYVELL 1042 Pirellula staleyi
WP_013110348         1070 -----------------------------------eEFVEKVFQQLMTRAPSVQEKAMFVEFL 1097 Planctopirus limnophila
jgi:Plabr_2898       1017 -----------------------------------dSLIDSLFLRILSRPPRAEERAIYTELL 1044
Q7UTM0               1153 -----------------------------------dSLTESLFVRFLSRRPTDDERELFANVL 1180 Pirellula sp.
WP_013630516         1154 -----------------------------------eELVEQLYLSILTRYPTQEELAALTPLL 1181 Rubinisphaera brasilie...
jgi:Sinac_0433        887 -----------------------------------eRLVDRLFLRILTRQPLDDERKSIVAYL 914 
Q7UPP5                622 ------------------------------------NRIDAIFLSVLTRKPSTEDRILASREL 648  Pirellula sp.
WP_013628368          585 ------------------------------------DAVDTIFLSILARYPTEQERAIANAey 611  Rubinisphaera brasilie...
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap