1HJP,1IXS,1BVS


Conserved Protein Domain Family
RuvA_C

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pfam07499: RuvA_C 
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RuvA, C-terminal domain
Homologous recombination is a crucial process in all living organisms. In bacteria, this process the RuvA, RuvB, and RuvC proteins are involved. More specifically the proteins process the Holliday junction DNA. RuvA is comprised of three distinct domains. The domain represents the C-terminal domain and plays a significant role in the ATP-dependent branch migration of the hetero-duplex through direct contact with RuvB. Within the Holliday junction, the C-terminal domain makes no interaction with DNA.
Statistics
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PSSM-Id: 400055
View PSSM: pfam07499
Aligned: 85 rows
Threshold Bit Score: 29.7688
Threshold Setting Gi: 123740945
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1HJP_A 158 DAEQEAVAALVALGYKPQEASRMVSKIA----RPDAS-SETLIREALRAAL 203 Escherichia coli
Q9PQ41 142 NWAKELSIGLENLGYTKKDIEYAITKVKin-sQQDID-ISEIISSAIKEIS 190 Ureaplasma parvum serovar 3 str. ATCC 700970
Q8EWC5 158 NPVPDLVSALKALGYKKNMIEKAINLLIpqlsNVSEDqISDLISQAIKIIS 208 Mycoplasma penetrans HF-2
Q98PR2 144 QNISDATETLKMLGFKREQIKYALESA-----NLQDD-VETLVENAIKKIS 188 Mycoplasma pulmonis UAB CTIP
Q6KI20 150 KKITELSNTLKTLGFKTNQINYAISNI-----NDKND-IEEMLEESIQLIA 194 Mycoplasma mobile
P75243 149 NDYDEMFDTLKSLGYKPQDIQNALSKIEi---KPNFD-VSEVIAEVIKLMS 195 Mycoplasma pneumoniae M129
Q8XJ13 156 FNINETLSALMALGYTEKEAQKALEKV-----DKTLS-IENMIKESLKLLM 200 Clostridium perfringens str. 13
Q97GT0 156 KKLEEVRFALNSLGYSEKETDRAINNV-----DKSEG-IENIIKSCLRFLM 200 Clostridium acetobutylicum ATCC 824
Q891Z7 152 LHSAEALEALMSLGYSQKESEKALKNV-----DKENS-LEDIIKACLKYLM 196 Clostridium tetani E88
A6TQM4 148 KNNNEVVDALMALGYTKHEGEQAASAVR----DTSLS-TEEMIRKALNWLA 193 Alkaliphilus metalliredigens QYMF
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