Conserved Protein Domain Family
DUF1495

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pfam07381: DUF1495 
Winged helix DNA-binding domain (DUF1495)
This family consists of several hypothetical archaeal proteins of around 110 residues in length. The structure of this domain possesses a winged helix DNA-binding domain suggesting these proteins are bacterial transcription factors.
Statistics
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PSSM-Id: 369338
View PSSM: pfam07381
Aligned: 11 rows
Threshold Bit Score: 105.092
Threshold Setting Gi: 121676537
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q0W465          11 I-RSVHECKSRDIVLDFLHANMENAYHPIAIIKSTALKRPHVIGALEGGAGGMESRCSLVSQGMVSRELS--SQGPA--R 85  uncultured me...
Q0W464          10 VmSAIIKSMVRFKVLVFLASHPREEFDAPNMAHRIRSASENVTGALEGYEKRYSKALSLVSLGLVTYREK--EPGTR--V 85  uncultured me...
Q0W601           8 IvASIGRSSVRKKILLYLY--HSTASTMYDIARDTRTAYTNATGAIAGFGKRYGKERSLIHLGLVRMEKG--NRGLN--V 81  uncultured me...
Q0W5R0          19 IyHSMIRSQARRKILLDLKRNGP--GNTTDLSTRTGYHYSNTRGALVGNGEKYDSELSLVTTGLANA-----DPGTKeiI 91  uncultured me...
Q0W4R7          13 ImYAMRKSVVRMKILVYLF-VCGEPRNIQQITNVVGTWPSHVRGAMWGMGKRYNAESSLLARGLVARLSGdiNSNVT--T 89  uncultured me...
Q0W4L2          14 IySALNSSRVRQDVYEYLCSIYPRKAFIQELSKETRHSVTNLKGSLEGDGISFSYDDALIELGLAE------SAEIR--L 85  uncultured me...
Q9HJ88          14 IlRSLNRSELRRKVLFYLLSIYPYRSYLSEISRAVKSDPSNVKGCLEGLGVRYTGEESLIGLGLVIVEQS--KNGFK--Y 89  Thermoplasma ...
jgi:Ferp_1464   14 IlRSINKSVLRKKVLFYLYSIYPNYDYLANISRRVRSDPTNVLGCLKGMGNRYNGSSSLIELGLV-EVVE--KDGYK--Y 88  Ferroglobus p...
jgi:Metho_2558  18 liRSLMRSEVRKSILLYLYDIYPLSSYPAEIARRVNANPINVIGAIKGVKTRYNCSSSLLHLGII-SVIE--DNGLK--F 92  Methanomethyl...
Q6LWJ1          13 IiRSLNKSKLRKKIVYFLYDIHPHGTYLSELSRRVKSDPSNVLGCLKGMGNRYNGSSSLIELGLV-NCDG--KEGMK--I 87  Methanococcus...
Q58315          10 IiRSLNKSKLRKKILYLLYKMYPHGIYLSEISRRVRSDPSNVLGCLKGMNGRYNGHFSLIELGLV-ECVE--RGGVK--I 84  Methanocaldoc...
Q0W465          86 YR-------ITPPGIAIVEF 98  uncultured methanogenic archaeon
Q0W464          86 YK-------ITPEGIAFAEK 98  uncultured methanogenic archaeon
Q0W601          82 YS-------LTPEGRRLADV 94  uncultured methanogenic archaeon
Q0W5R0          92 YS-------LTPTGEEVANI 104 uncultured methanogenic archaeon
Q0W4R7          90 YT-------LTEKGRAYVLl 102 uncultured methanogenic archaeon
Q0W4L2          86 YRkiaksfgATEQGFRIRDR 105 uncultured methanogenic archaeon
Q9HJ88          90 FK-------INP---EIVEE 99  Thermoplasma acidophilum
jgi:Ferp_1464   89 YR-------ITDLGRKVVEY 101 Ferroglobus placidus DSM 10642
jgi:Metho_2558  93 YQ-------ISETGIELAKH 105 Methanomethylovorans hollandica DSM 15978
Q6LWJ1          88 YQ-------MTTYGKTVVEY 100 Methanococcus maripaludis
Q58315          85 YK-------LTDYGKKIVEV 97  Methanocaldococcus jannaschii DSM 2661
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