Conserved Protein Domain Family
PDCD9

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pfam07147: PDCD9 
Mitochondrial 28S ribosomal protein S30 (PDCD9)
This family consists of several eukaryotic mitochondrial 28S ribosomal protein S30 (or programmed cell death protein 9 PDCD9) sequences. The exact function of this family is unknown although it is known to be a component of the mitochondrial ribosome and a component in cellular apoptotic signaling pathways.
Statistics
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PSSM-Id: 399848
View PSSM: pfam07147
Aligned: 23 rows
Threshold Bit Score: 499.604
Threshold Setting Gi: 0
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
O61818               17 KATTAGADLPqSSQEIEvttpkSENVPAKSANAST-------------VYRPpyyrkphqhhepkhmlqeeFVNAGDASG 83  Caenorha...
XP_002639732         17 KASTAAd----IPKEEVvqtskSEEVAPKAANAST-------------VYRPpyyrkphkyhesshilqeeFANAGDASG 79  Caenorha...
EEZ98800              2 SALRLNKNLLkRCKKFKcf--sTAVLQEDEYTATP-------------QYPP-------------------I---LDMSP 44  red flou...
Q9VXP3                8 RHLRT-------TYKRCls--gQSQLQLNSTDAEP-------------AYPE-------------------I---QDLSF 43  fruit fly
WGS:AANI:GJ18480-PA   8 EQLRARLNAAcRRYLAIkaepkAVTVAESEYSAEP-------------EYPA-------------------I---RDMSF 52  Drosophi...
Q29CP7                8 NQLRA-------SYIRFva--qATSATSNEYSCQP-------------EYPP-------------------I---RDLTH 43  Drosophi...
Q16NZ6                4 QSFRRNLQLMlRSTNRLslstrALANPSEQYTAQP-------------QYPA-------------------I---EDPSF 48  yellow f...
XP_322027             4 RNFRPNLWLLgRHGHRAla-srPLPSKEHEYTNSP-------------EYPP-------------------I---QDLSF 47  Anophele...
XP_023116621          1 MAAARCCRLA-LRRSRL-----SLHTAAEAAVAAPevtgavvaaapvaRYPP-------------------IVASLTAKS 55  domestic...
XP_006095448          1 MAAARWWRLV-PRGPGR-----SVHSAAQAAVGTPdipgaegaaapvaRYPP-------------------IVASMTADS 55  little b...
O61818               84 AGVRVFDYYKTAEMVHSMPTIKEKIDFVSPYERPwtraektwrrdwhptLMatrkawGIPPTPAHFDTLDYYKYLTKTRV 163 Caenorha...
XP_002639732         80 AGVRLFDYYKTAEMVNAMPTIKEKIDLVSPYERPwtraertwrrdwhptLMatrkawGIPPTPAHFDTLDYYKYITKTRV 159 Caenorha...
EEZ98800             45 EKVRERRKEEEYEGIKAVKTVEEKQ---IKLNMP---------------KYygfksyMLYEDYIPYNSLPLIQHVTRTHL 106 red flou...
Q9VXP3               44 KARKQKDAANWHEEIRQVPTVEEKM---IKINMP---------------RYygfkvvDFNDSKIPYNALPLTQHYTRTVL 105 fruit fly
WGS:AANI:GJ18480-PA  53 KGRKLQSAAEWHEEIRQVPTVEEKM---IKINMP---------------RYygykvvDLNDTKVPFNALPLTQHYTRTVL 114 Drosophi...
Q29CP7               44 KALKRREANDWHEEIRKVPTVEEKI---IKVNMP---------------RYygykvvDFNDNKIPYNALPVTQHYTRTVL 105 Drosophi...
Q16NZ6               49 RSKKKREAAEWHERIQQLSSVEEKL---FEINMP---------------KYygykahIITDQKFPYNVLPLAQYATRTHL 110 yellow f...
XP_322027            48 PAKKKRERESWHQKIAKLSSVEEKL---FEINMP---------------KYygykmnMLTDEKFPYNIKPFMQYATRTCF 109 Anophele...
XP_023116621         56 KAARQRRVERWQATVHAAESVDEKLRILTKMQFM---------------KY------VVYPQTFALNADRWYQGFTKTVF 114 domestic...
XP_006095448         56 KAARQRRVERWQAAVHAARTADEKIRILTKMQFK---------------KY------VVYPQTFALNADRWYQGFTKTVF 114 little b...
O61818              164 en-----------------------esLDDFYHGLRPPTAD-LQTS-----FQNtLKSMEFGDGINFSDEDTQKLFGSLI 214 Caenorha...
XP_002639732        160 en-----------------------ksLDDFYHGLRPPTAE-LQQS-----FQNtLKSMEFGDGITFSEEDTQKLFGCLI 210 Caenorha...
EEZ98800            107 iknenlpnf-------------yndldvtsaLNDVKSDIEEaILIElarhrQTLdLQG----DKVEADNRLGFALSKQIN 169 red flou...
Q9VXP3              106 edlpsetdkkaq---akdseqeqeqpsVDGLFKAARGDVIDaLEFAhdyykHLEkQHNSAESNPVERERILTQIIVEQLN 182 fruit fly
WGS:AANI:GJ18480-PA 115 eelppkqa-----------epgeekvdLDATVKVARNDIIEaLEFAhdcykHQLtLLD-TPPDAVTREQQLTQIIVEQIN 182 Drosophi...
Q29CP7              106 kelpllsad----------etetsefsSVAFLKTARDDIIDaLELAhdfynHQAtLPDVAPSDSVNRERQLTQIIVEQLN 175 Drosophi...
Q16NZ6              111 qenlpety-------------gklgeeakKLLEEIRGNLEDvIGFEltgysRSY--GSNEEISPEEKEEIVTSSLLTALN 175 yellow f...
XP_322027           110 qtglpqyy-------------dplkeeaaKILESIQTELEDtIALElsnysH---VKRDETVSPVEKEETVVRSLLVQLN 173 Anophele...
XP_023116621        115 lsglpppppg--------epaepaepsPTLDLEALRAAACDcLLQE-----HFY-LRRKRRAPLYQDREAIASPFLDQLV 180 domestic...
XP_006095448        115 lsglpppaepgsppsesgsppaepappPVPDLATLRAAACDcLLQE-----HFY-LRRQGRAPLYQQVEAVASPFLDQLV 188 little b...
O61818              215 DDAMGGIAHNVSRLADHRVAYDVESEAFWVRSGFMFLydee-eigtRDVKRRLNNFPKFIGDDrrklgelafvhrdKLAA 293 Caenorha...
XP_002639732        211 DDAMGAIAHNVSRLADHRVAYDVESEAFWVRSGFMFLydepvigsnKDHKRRLNNFPKFIGDDrrklgelafvhrdKLAA 290 Caenorha...
EEZ98800            170 RIITTRMSRHLPHLKGAQVDLNSRIKSFWLAGGMSPP---------ENIKRYR-RGCSWQKDKeneptnrvmnyigSANV 239 red flou...
Q9VXP3              183 RALLQSLSEEYKHLDELDVDYNPRHEAFWAVGGVDPP---------KNVQKSK-KGREWQKDManesvdrmvqytgAPYL 252 fruit fly
WGS:AANI:GJ18480-PA 183 RSALQVLSAEYPHLNEVEIDYNPRHEAFWAVGGVDPP---------KNVVKSK-KGRDWQKADaydsvdrlvqytgEPYL 252 Drosophi...
Q29CP7              176 RALLQILSADYPHLNDVEVDYNPRHEAFWAVGGVDPP---------KNVVKSK-KGRDWQKDDasesvdrlvqytgAPYL 245 Drosophi...
Q16NZ6              176 RALINSLSKKYTHLNEVETDFDPRHESFWFLGGIPPP---------SLVKKIK-EGVEWQKEYandpydrkiqyigKPYI 245 yellow f...
XP_322027           174 RTIANALAPKFNHLNEIETDVDPRHEAFWFLGGIYPP---------NLVRKIK-EGVEWQKQYandpydrniqyvgKPYM 243 Anophele...
XP_023116621        181 AALVGLLSAHNPALATAALDCKRPVHFYWLRGEEIIP---------SGHRKGRVDALRYQIND-------------KPHN 238 domestic...
XP_006095448        189 AALMGLLSEHNPALATAAlDCKRPVHFYWCRGEEIIV---------HGHRKGRVDAVRYQIND-------------TPHN 246 little b...
O61818              294 QVRSKEPSA-PLHSFDSedaklpIFDTNYnfeetlfspKVYNLWPDQEPLWQCPGYHADS-------GESHTYGILGVKS 365 Caenorha...
XP_002639732        291 QIRSREPPA-LLHSLDSddaklpVFEKDFnieetlyspKVFNLWPDQQPLWQCPGYHADS-------GETHSYGLLSVKS 362 Caenorha...
EEZ98800            240 SLRTDLPLKhIISSSDAesp-----dlSV---------PFFEFDPRTVGTVANQHRHIANvpg-fwpGDSREFGFLSYH- 303 red flou...
Q9VXP3              253 ALRHRKQLT-PWK-TEAese-nlELSKQL---------PRFKHDPRTLG-YSTKHQHATNvpgywpkGNENNFGLLSFQ- 318 fruit fly
WGS:AANI:GJ18480-PA 253 ALRHRHQLP-TWK-TPEese-nlTLANQL---------PRYKHDARTLG-YSTKYQHAINvpgywpsVNAPNFGMLSFQ- 318 Drosophi...
Q29CP7              246 SLRHRQQLC-PWM-TDGeskmmdPHARHL---------PRFNHDARTLG-YRTSYQHAVNvpgywpsANGANFGLLSFQ- 312 Drosophi...
Q16NZ6              246 ALRHKHPLD-VFAENNVdnldakRDGVEI---------PEFRFDPITLG-YKTEQRHATTipg-fwpGDQHEFGLVSFQ- 312 yellow f...
XP_322027           244 ALRHKLLLE-PLLPKDLesfdvkQDGAEI---------PDYRYDPLALG-YIADFRHATTvpg-fwpGEQHEFGLLSFQ- 310 Anophele...
XP_023116621        239 QIRMSKQLP-EFVPLDY------SVPVEI---------PVMNCKPDKLPLFKRQYENTIFigs--ktADPYCYGHTQFHL 300 domestic...
XP_006095448        247 QIRMSKQLP-EFVPLDY------SVPIEI---------PVMNCKPDKLPLFKRQYENAIFigs--ktADPYCYGHTQFHL 308 little b...
O61818              366 LRPLRKRiahwmgweNENELESseeAKQMLDDGARSQAIISMFTTLCAQAHTHGFTQYTDITRSFTSQLVLSDGINFWFA 445 Caenorha...
XP_002639732        363 LRPLRERvahwmgweSQAELEEspeAKQMIDDGARSQAVISMFTTLCAQAHTHGFTQYTDVTRPFTSQMILSDGLNFYFA 442 Caenorha...
EEZ98800            304 -----KR--------GHLISRHy-gDANELKEAVDRQGILASFGWLNAQANFQGFTTFNDVTYPFVTQTVVTNGQVWSFY 369 red flou...
Q9VXP3              319 -----SR--------AHLQIRPksfGEQDQLEALHSLAIKSSYAWLLAQANYNGFNTYNELTYPMNTQTVITNGREWSFY 385 fruit fly
WGS:AANI:GJ18480-PA 319 -----SR--------AHLQLRPqacGERDQLEALHALGIQSSYAWLLAQANYNGFNTYNELTYPLNTQTVITNGREWSFY 385 Drosophi...
Q29CP7              313 -----SR--------ASLQMRHkayGDRDLQEALHALAIKSSYSWLLAQANYNGFNTYNDLTYPMNTQTVITNGREWSFY 379 Drosophi...
Q16NZ6              313 -----RR--------SHAHLRPsycAIDDLQEALHAQGIFSSYAWTLGQACYQGFSTFNDLTYPLATQTVITDGKMWSFY 379 yellow f...
XP_322027           311 -----RR--------SHALNRHkycAVDDLSEAIDAQGILSSFAWLLGQACYQGFSVFNDVTYPLTTQTVITDGKYWSFY 377 Anophele...
XP_023116621        301 LPDKLKR--------ERLLKQN---CADQIEVVFRANAIASLFAWTGAQAMYQGFWSEADVTRPFVSQGVITDGKYFSFF 369 domestic...
XP_006095448        309 LPEKLNR--------ERLLRQN---CADQIEVVHRANAIASLFAWTGAQAMYQGFWSEADVTRPFVSQAVITDGRYFSFF 377 little b...
O61818              446 IGQLNTIAINVECDGfVNPRTNYIRIDGPYRLFDYCdKNGQYLsvqeeidaenkvqrkiapGLNEKVLERVTQMLM 521 Caenorhabdit...
XP_002639732        443 VGQLNTLAINVDCEGfVNPRTNFIQIDGPHRLFEIVdEDGNYTssqeyvdaknnvnrrvdsGLNEKvlervtqmlm 518 Caenorhabdit...
EEZ98800            370 VYQLNTIVNHSKFFT-ENAKRNVCWGTPEVKLFEGV-ENDKLV------------------GFNDEVLKMLLKFYA 425 red flour be...
Q9VXP3              386 EYQLNTLLLHGTNVA-ENPRVNFCRGTKPLPLYAEIsASGKCV------------------DFNDNALRHLLNFYA 442 fruit fly
WGS:AANI:GJ18480-PA 386 EYQLNTLLVHGPHVD-SNARVNFCRGTAPQPLYAEIsPEGKCV------------------DFNDGTLRQLLTLYI 442 Drosophila v...
Q29CP7              380 EYQLNTLLLHSNQVN-ENPRVNFCRGTPPLPLYAEIsEKGKCV------------------DFNDATLKQLLRVYM 436 Drosophila p...
Q16NZ6              380 AYQLNTTLLHSDQVD-VNPRYNQCWGTKELQLYEHVdENGKVH------------------GMNDEVLLHLISFYM 436 yellow fever...
XP_322027           378 AYQLNTTLLHSDQVD-ANSRYNLCWGTDAMQLYESIdENGKIN------------------GLNKEVLQQIIMFYI 434 Anopheles ga...
XP_023116621        370 CYQLNTLALTTQADQ-NNPRKNICWGTQSKPLYETI-EDNNVK------------------GFNDDVLLQIVHFLL 425 domestic cat
XP_006095448        378 CYQLNTLALTAQADQ-NNSRKNICWGTQSKPLYETI-EDNDVK------------------GFNDDVLLQIVHFLL 433 little brown...
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