2II9,1NC7


Conserved Protein Domain Family
ASRT

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pfam07100: ASRT 
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Anabaena sensory rhodopsin transducer
The family of bacterial Anabaena sensory rhodopsin transducers are likely to bind sugars or related metabolites. The entire protein is comprised of a single globular domain with an eight-stranded beta-sandwich fold. There are a few characteriztics which define this beta-sandwich fold as being distinct from other so-named folds, and these are: 1) a well conserved tryptophan, usually following a polar residue, present at the start of the first strand; this tryptophan appears to be central to a hydrophobic interaction required to hold the two beta-sheets of the sandwich together, and 2) a nearly absolutely conserved asparagine located at the end of the second beta-strand, that hydrogen bonds with the backbone carbonyls of the residues 2 and 4 positions downstream from it, thereby stabilising the characteriztic tight turn between strands 2 and 3 of the structure.
Statistics
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PSSM-Id: 399827
Aligned: 30 rows
Threshold Bit Score: 150.87
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2II9_D            5 IGRTCWAIAEGYIPPYGNGPEPQFISHETVCILNAGDEDAHVEITIYYSDKEPVGPYRLTVPARRTKHVRFNDLN--DPA 82  Anabaena sp.
1NC7_C           24 NGARKWFFPDGYIPNGKRGY---LVSHESLCIXNTGDETAKIRITFLFEDSKPV-VHEVEISPXKSLHLRLDKLG----- 94  Thermotoga m...
WP_013159231      8 SGAQTWFVPDGYLP--ARGPEGTYVGHDCVCLLNTTSQEARIWLDIYFEDQDPVEGLEVRLLPKRCLHLRMDKPEmlGGF 85  Meiothermus ...
WP_012582807      5 IGAKIWLIPDAYLPEIGDPN---LPSHESTCILNVNDKPAKVKFTFYFEDRDPIESKEIIVLPERTWHVRLDKSEeiLGV 81  Dictyoglomus...
Q1AVD1            9 eGALVWLVPDGFIPERSTGG---LESHEAVCVLNASRREARLSLTFYFEDREPVRGEGVVVPAERTRHLRTDRPEevGGA 85  Rubrobacter ...
jgi:Theco_1262    5 FGHTHWIIPDGYIPETSSGA---LVSHESVCVLNGSSVEALLKFTIYFEDRDPIEDIPYVVPGRRTKHIRTSSLVk-DGE 80 
jgi:GYMC10_4331   3 KGEKQWIIPDGYIPPESSGE---LTSHESVCVLNLTEQDVVVTIHAYFEDRDPLLGMETIVPARRTKHIRTSSLRtgDGQ 79 
ADO54803         16 rGSLFWVIPDGYIPPESRGE---LLSHESICVLNCGNRAAKLSIDIYFEDREPLEGMIEVVEGRRTRHIRTASLEk-SGE 91 
WP_015358359      5 AGSRVWFIPDGFYPSTSSGK---LKSHEAICVLNPNREDAHISITLYFEDREKMTGFEAVCGAERTKHIRMDQLKdkNGN 81  Thermoclostr...
jgi:Aaci_0707     1 mtvfRWLIADGFIPSTSQGQ---LESHESLCIVNPHSNDASVQIKVFFEDRDPIEGIAVVCPSGRTRHIRVDTLTgsDGR 77 
2II9_D           83 PIPHDTDFASVIQSNVPIVVQHTRLDSRQAENALLSTIAYA 123 Anabaena sp.
1NC7_C           95 -IPKCKPYSIXAESNVPVVXQLSRLDVGKNHYTLXTTIGYW 134 Thermotoga maritima
WP_013159231     86 EMPREVPYALRVRSSVPIVVQYSRLDVTQANMAFLSVMGFP 126 Meiothermus silvanus
WP_012582807     82 KLERNVPFAIKVESDVKIVVQHSRLDTRQPNLSYMTAIAWN 122 Dictyoglomus turgidum
Q1AVD1           86 RVPRGVPYAVRVESDVPVVVQHSRMDTGQEALALMTALAHP 126 Rubrobacter xylanophilus DSM 9941
jgi:Theco_1262   81 QIPAGVPYAIEVRSDIPVVVQYSRMDATQAENALMSVMAYP 121
jgi:GYMC10_4331  80 GIPPGIPYAMEVTSSAPVFVQYSRLDSTQAENALMSVMAYP 120
ADO54803         92 RIPPGIPYAITVTSDVPIIVQYSRLDTTQPELALMSVMAYP 132
WP_015358359     82 GVPMDVPYAMMVESDVEIIVQYSRMDTTQSEMALMTTIAYP 122 Thermoclostridium stercorarium
jgi:Aaci_0707    78 TVPRGVPYAMELTCPLEVGVQLSRLDSTQSQLALMTVSgvr 118
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