Conserved Protein Domain Family
Senescence

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pfam06911: Senescence 
Senescence-associated protein
This family contains a number of plant senescence-associated proteins of approximately 450 residues in length. In Hemerocallis, petals have a genetically based program that leads to senescence and cell death approximately 24 hours after the flower opens, and it is believed that senescence proteins produced around that time have a role in this program. This family extends to the higher vertebrates where the full-length protein is often a Spartin, associated with mitochondrial membranes and transportation along microtubules.
Statistics
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PSSM-Id: 399715
View PSSM: pfam06911
Aligned: 129 rows
Threshold Bit Score: 94.5688
Threshold Setting Gi: 549050294
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_007848507  223 MTTSASLVSHAISGTTNLLVRVISGASNYYISHSQPSphhsstnlarsgdasgsstPPPppppraLVFltSEKTRKNLAK 302  Moniliophthor...
XP_012400172  365 ILAGASWLSWGLVRGAELTGKAIHKGASKLRDHIEPE-------------------EKP------LEV--SPAVSKGLNI 417  Tasmanian devil
1_pfamImport    1 ILTGATRLSVGFAKGAEATGRAINKGAAKLREHITPE-------------------ETP------SEV--SPHVTKSLEA 53  
XP_004076342  376 ILSGATRLSQSLAKGAEATGSFIHKGAAKIRDRITPE-------------------ETP------SDV--SPQVAKRLQT 428  Japanese medaka
XP_005463302  381 ILTGALRLSESLVKGAEVTGRAIHKGAAKIRDQLTPE-------------------ETP------SEV--SPSTTKRLEM 433  Nile tilapia
AAI54515      350 ILAGSSWLGRGLVRGAEATGKAIQRGGTKLRDNITPE-------------------ETP------AEV--SPKVTKGLNA 402  zebrafish
PDM74870      471 LMKSSEKVAWTVQKTSVRTASLVHQKSEKWRS-APPT-------------------DKP------MLV--SPTVKSGVVY 522  Pristionchus ...
O44735        262 LIKGGQKIAWGVETTTVRVISRVEDNGEQYRTTLIAT-------------------DKP------MQV--SPVIKGSVVY 314  Caenorhabditi...
XP_022537203  356 ILAGASWLSRGLVQGAEATGKAISKGATKLREHMTPE-------------------ETP------AEV--NPRVTRGLQV 408  Mexican tetra
CAG00427      468 ILSGATKMSEGLAKGAEATSRQIQKSGDRLRDRMTPE-------------------ETP------SNV--SPHVTRGLNV 520  spotted green...
XP_007848507  303 VQTVSTQAAKVSGKTIAIIDDIIYRAINGKEKSskgKGTtstlaapvpqsgtnsgrtspapppytsqvnlaaggnnkppl 382  Moniliophthor...
XP_012400172  418 AKQATGGAVKVSQFLVEGVCSIANCVGRELAPHvkkHGSklvp------------------------------------- 460  Tasmanian devil
1_pfamImport   54 ARQATGGAVRVSQFIVNGVSTVAGLVAEKMAPHvkkQGSklvp------------------------------------- 96  
XP_004076342  429 AKQATGGAVRVSQFLVNGLSHIAGHVVDKVSPHmkkHGSklvp------------------------------------- 471  Japanese medaka
XP_005463302  434 ARKATGGAVRVSQFLVNGVGTVAEKLAEKMAPHvkkHGAklvp------------------------------------- 476  Nile tilapia
AAI54515      403 AKQATGGAVKVSQFLVDGVAAVAGKVGKELAPHvkkHGCklip------------------------------------- 445  zebrafish
PDM74870      523 VHKGSKVVAKCTRYLLDKIGDVGVSVGRKVANGaksTFGdgk-------------------------------------- 564  Pristionchus ...
O44735        315 MHKGTKTVAKCTRYLLDKIGDMGVSMGKKLADSaqrR------------------------------------------- 351  Caenorhabditi...
XP_022537203  409 AKQATGGAAKVSNFLVGGLSSVVELVGKELTPHvkkHGSkli-------------------------------------- 450  Mexican tetra
CAG00427      521 ARKASGGAVRVSQFLVNGVAKVAGHVAEKMAPHvkkHGSklvp------------------------------------- 563  spotted green...
XP_007848507  383 pprasgstvplnrsnspnPAPppplppR---KLGFKGRIIL---SADLILSTIDESTKKLINVGADSATAIVQHKYGTEA 456  Moniliophthor...
XP_012400172  461 ---------------eslKKDkdg-ksTldgAMVVAASSLQ---GFSTVWQGMECAAKCIVKKVASETVNTVKHKYGDDA 521  Tasmanian devil
1_pfamImport   97 ---------------esmKTSkdggpsSwdgAKFVAISSVHakpGLSTVWSSLETGAKLVGKSVTAETVTTVTHKYGNDA 161 
XP_004076342  472 ---------------eslKKSqdghasNwdgTKYVAARGVQ---GFSTVWSSLESGAKEVCKSVATETVTTVKYKYGHNV 533  Japanese medaka
XP_005463302  477 ---------------ealKKKedgqasKmdgAKFVAVTTVH---GLATIWSSLETGAKLVGKSVAAETVSTVTYKYGSNA 538  Nile tilapia
AAI54515      446 ---------------eslKKGkdg-ssKmdgAKLVAGSSIQ---GLSTLWSSLETAGKTIGKSLSSETVTTVRHKYGDEA 506  zebrafish
PDM74870      565 ------------------------gggVvagTITVLGGGIA---GVSTVWIALEDASKTLCRSIADDTVGVVKVKYGDDA 617  Pristionchus ...
O44735        352 -------------------FGdgksggLvsgTIEILGGGIT---GVATVWMSLEDGSRHLCRSIANQTVQNVKLKYGDDA 409  Caenorhabditi...
XP_022537203  451 ---------------pesFKTnkeacaNmggAKAVAASSLK---GLSTIWSGLETAAKTVGKSASSETVQTVKHKYGDQA 512  Mexican tetra
CAG00427      564 ---------------esmKKGkdgqasNldgAKFVAVSSLQ---GFSTIWTSLENGAKLIGRSVSSETVMTVKHKYGDDA 625  spotted green...
XP_007848507  457 AQTSTIMGNTARNIGLVYIDVRGVGRKA 484  Moniliophthora roreri MCA 2997
XP_012400172  522 GHATDNVMNSAINVGVTAFNIDNIGIKA 549  Tasmanian devil
1_pfamImport  162 GTATDTGLKSVINVAVAAYNFDNLGIKA 189 
XP_004076342  534 GQATDTALQSVANIGLTAYNIDNLSLKA 561  Japanese medaka
XP_005463302  539 GEATETALQSVINIGVTANNIDNAGIKA 566  Nile tilapia
AAI54515      507 GQAADTAVQSTVNVGVTAFNMDNVCLKG 534  zebrafish
PDM74870      618 ASTTHHTLYAAGHGTLAAAQLWDLGPRS 645  Pristionchus pacificus
O44735        410 SDTTHHALFAAGHGTLAAAQLWDLGPRS 437  Caenorhabditis elegans
XP_022537203  513 SQATDTAVQSVLNVGVTAFNIDNFGLKA 540  Mexican tetra
CAG00427      626 SQATDTAIQSVANIGVAAYNFDNLAIKA 653  spotted green pufferfish
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