Conserved Protein Domain Family
Extensin-like_C

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pfam06904: Extensin-like_C 
Extensin-like protein C-terminus
This family represents the C-terminus (approx. 120 residues) of a number of bacterial extensin-like proteins. Extensins are cell wall glycoproteins normally associated with plants, where they strengthen the cell wall in response to mechanical stress. Note that many family members of this family are hypothetical.
Statistics
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PSSM-Id: 399709
View PSSM: pfam06904
Aligned: 81 rows
Threshold Bit Score: 164.698
Threshold Setting Gi: 217504800
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q2W0A1                    35 SACLQDLRNHHVVFETQAPFGTAG--TCSVGNPVKVSA-----DSqTSWNRPGLMSCSMARTVDRFETQVVQAAAQRIF- 106 Mag...
BAF87485                 146 AACASLVQQ-NIMVAAAAPPIGGGkgACAVPSPVQLSAvrledGTtVTLQPAATLRCDAAVAVTQWVREDLSRAAMEL-- 222 Azo...
jgi:Xaut_2474            133 AACAALIEE-GTMVATLEAPITPAg-GCGLAQPVRLTGvrlqdGRlVAFKPAAVTRCEVAAAVADWLREDLAPAVAAL-- 208 Xan...
WP_012330018              90 TACLSRLERLGARAEPLPALADGL---CGAPKPLRVVEl----PDgIQLSPPATLTCRAAEALARWSTE-VRVLAERDL- 160 Met...
WP_012319886             152 SACRTRLKRLGVDFEPLPPISEGQ---CTAPLPLKVTKf----ADgVALPQGATLTCRTAEALARWVTE-VQVEAERTL- 222 Met...
PRJNA212980:JCM7686_3085 118 SACLLTLFTLGTGYEELPAISEADnrDCGIDRPVRITEi----lPgIALDGAPVMRCDTARHLAFWLRDSVRPASA-FLp 192 Par...
jgi:Pden_2107             97 SACLLELTLLGADYSEAPPILDPDqrDCGIDRPILLRQp----lPgIEIPGGAPMRCDLARHLAHWLRDFVRPAAA-LLp 171 Par...
WP_015916762             136 gQCLKDLKAAGAQFTERPRIDDGD--GCGIDKPLEVTQi----lPgVSLKPKATLRCAAALELSEWMRTLVIPAADQALp 209 Agr...
vbi:Arad_3258             84 KACLTQLTAIGATFKDIPRIDDSN--GCGIDKPIALAEp----lPgIQMKPQGTMRCETALALAHWMKESVIPSAA-TLk 156 Agr...
WP_012708870              91 ASCLAALKEIGATFAETSRIDDGK--GCGIDKPIKVESv----lPgVALKPEGVMRCETALALARWTKETATPAAQTAFg 164 Sin...
Q2W0A1                   107 -GQKVARLHHMGTYNCRTRRTettvaaaDMgsrG--GRLSEHGKGQAIDVGGFELADGT-MISVKKDWrgAGKKSEFLQA 182 Mag...
BAF87485                 223 -GGRLDTVKVAASYDCRSRNR-------IA---G--AKISDHGMGIAMDVGGVVLDDKR-VYEVKGNG----LPMALQAS 284 Azo...
jgi:Xaut_2474            209 -GSQVASVTVAASYDCRSRNR-------IS---G--ARMSEHGLGNALDVGGFELADAR-MVKVEKGG----LPQRLRAA 270 Xan...
WP_012330018             161 -GRPPRSLRISTSYECRGQNH-------DP---D--AKLSEHAFANAIDVMGFTFEGRE-PIGIG-TQaeGTPEGRFQAA 225 Met...
WP_012319886             223 -KHPVTALELGGSYVCRGQNH-------DV---D--AKLSEHAFANAADIMGFAFAGRA-NIPVK-AMpdGSEEAQFLGA 287 Met...
PRJNA212980:JCM7686_3085 193 gAPRLTGIEPGSTYQCRGVVG-------GQ---St-ATVSEHALGNAFDIAAFRFDDGT-RLEIAPRQdkGSIDEAFQAA 260 Par...
jgi:Pden_2107            172 gQPRLVALEPGSTYQCRSTVG-------NQ---G--ENLSEHAFGNAFDIAAFRFDDGT-RIAVEPRQdsGDLHEAFQSA 238 Par...
WP_015916762             210 dKGRLKAVDQASSYICRNRNS-------RS---D--GKMSEHAKGNALDIAGFEFEKGNvPMKIVPDSe-PTLPGAFQRT 276 Agr...
vbi:Arad_3258            157 dNGRIVTVNQASTYICRLRNN------------AttGKISEHARGNAVDIAGFTFENGK-TIGIEPRRedPTLTGAFQRT 223 Agr...
WP_012708870             165 tKTSVTALNQASTYVCRLRNN------------AatGKISEHARGNAVDIASFSLSDGK-TIEIQPRDedGTLTGAFQRT 231 Sin...
Q2W0A1                   183 VARASCEHFNVVLTPNHNRLHADHLHLDI----GPHKLC 217 Magnetospirillum magneticum AMB-1
BAF87485                 285 MKASACSRFTTVLGPGSDGYHEDHVHVDLaqryLNIRLC 323 Azorhizobium caulinodans ORS 571
jgi:Xaut_2474            271 MKESACRRFTTVLGPGSDGYHEDHIHVDLaqrrLGIRLC 309 Xanthobacter autotrophicus Py2
WP_012330018             226 VRARACAFFRTVLGPGSDAEHGNHLHLDErernAGHRLC 264 Methylobacterium sp. 4-46
WP_012319886             288 VRAKACGFFRTVLGPGSNAAHANHFHLDErernAGHRLC 326 Methylobacterium radiotolerans
PRJNA212980:JCM7686_3085 261 IRGTACLWFTTVLGPGANAAHDNHLHLDIkarkGGFRIC 299 Paracoccus aminophilus JCM 7686
jgi:Pden_2107            239 AHGTACLHFTTVLGPGANAAHDDHLHLDIkarrGDFRLC 277 Paracoccus denitrificans PD1222
WP_015916762             277 INSSACLYFTTVLAPGADETHKDHLHLDLikrrNDYRVC 315 Agrobacterium vitis
vbi:Arad_3258            224 ASASACLYFSTVLDPDSDAAHETHFHLDVlkrnSGFRYC 262 Agrobacterium radiobacter K84
WP_012708870             232 VTASACLYFKTVLDPGSDAAHENHLHLDVierkNDYRYC 270 Sinorhizobium fredii
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