5XTA


Conserved Protein Domain Family
VirK

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pfam06903: VirK 
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VirK protein
This family consists of several bacterial VirK proteins of around 145 residues in length. The function of this family is unknown.
Statistics
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PSSM-Id: 399708
View PSSM: pfam06903
Aligned: 13 rows
Threshold Bit Score: 119.728
Threshold Setting Gi: 1233034684
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5XTA_C            3 ELNTFQNIVDAIAEGKRITFVINLKKCT---SEXPLNSAIVSVTPNAVXVIGDSRVTASDRHFTLDDplaRGTPXFDYSK 79  Legionella p...
jgi:Aave_1391    28 VLPTHAAIQQALDQGGNVSVAIDLSQCVp-qGAAAPSQTRGGLRIGAYRIVQDGTVSFSDSHFTVAG---DGQPIVQFMR 103 Acidovorax c...
IEC:ABF-0020481  25 SLKSADDVITALNKGQSVNVTIDLSACTp-qEGTPASKTRGGLHINAYRLIDTGTLSFSDEHFTVAN---DNTPIQQFMR 100 Dickeya dada...
Q8PDC2           25 TLNSRTDVLAALEAGYDVSVSTDLSRCTp-eEGTPVSRTRGGRHIDAYRITEDGNVAFSGAHFTVAN---DGKPIQQFMR 100 Xanthomonas ...
Q9PC40           28 PLNKQSEIIKVLDNGFPVSFSIDLSNCTp-eVGTPPSSTRGGSPIEGYRLTND-VLSFAEARLVVEQt--TGKPIQQVMR 103 Xylella fast...
WP_012916487     25 PLNSLADIEHALDSGNSVAVAVDLSQCTptsGGATPTQTHGGLRIGSYRVTADGTLSFADDHMTVGR---DGKPIQQFLR 101 Xanthomonas ...
Q8XX33           24 QMPDVLAAEHALSLGKPVTATIDLTRCTgdtATTPAGTTRGGVTVNPYRIQPDNTLSFSDTHFTVRS---DGTPITQFLR 100 Ralstonia so...
Q63MJ4           27 nssegafLESAVMAGKDIRVILDLSRCIehgTQIPGPAVRGSVRPDTFMILSDHSIAFSNTHFTVPA---DNKPVQEFMK 103 Burkholderia...
CBJ11509         20 QLTTFAGIADAVAQGKEITLVMNLQECTs--DNFPASPIIGSVKPNAFMVINNNRITASDRHFTLDNptaNGNPTFEYIK 97  Legionella l...
Q7CNV8           25 VLATFPEIALALTTGKPVDVMVDLSLCTpgtDDTPPTKTRGGIRIDGYRITSDGTLAFADQHFTIDR---DGKPILQFLR 101 Agrobacteriu...
P55686           25 VLASFPELERALTTGKPVTVTVDLGMCTpatSDTPSTKTRGGVSIDGYRITSDGTLAFADQHFTIDR---DGKPVIQFLR 101 Sinorhizobiu...
Q880Z8           23 SLASLPAITQALNTGASVAVVIDLGQCKssvAGAEPSKTKGGKRIDAYRITPDGTLAFSDTHFTLDR---ENKPIEQFIR 99  Pseudomonas ...
WP_011084653     27 PSPKYTEVLRALQAGKNVKLILDMTHCTnadGGKPASATQAGLVINAFRVTSQSGISFANAHQTVDS---SGHAVTEYIR 103 Bradyrhizobium
5XTA_C           80 FNLDSEGDASIKTTVLNASSY 100 Legionella pneumophila
jgi:Aave_1391   104 YQVRPDQSVDFSTWMFNLPGY 124 Acidovorax citrulli AAC00-1
IEC:ABF-0020481 101 YQVLPDNTVRFTTFMFNLPSL 121 Dickeya dadantii 3937
Q8PDC2          101 YQLRPDGSVRFTTYMYDLPGL 121 Xanthomonas campestris pv. campestris
Q9PC40          104 YSVYKNGNVHFEAYLYDVPTF 124 Xylella fastidiosa
WP_012916487    102 YQVHPDNSIDFTMFIFALPSY 122 Xanthomonas albilineans
Q8XX33          101 YSIDTSGTARFSSYIFAMPAY 121 Ralstonia solanacearum
Q63MJ4          104 YRANGDGKVEFQTMVLDPINF 124 Burkholderia pseudomallei
CBJ11509         98 YNINSDGKVSIKNTIMNATNY 118 Legionella longbeachae NSW150
Q7CNV8          102 YQIRLDGDAELTMVVFNMPSY 122 Agrobacterium fabrum str. C58
P55686          102 YRIRPDGGAEFTMVVFNVPSY 122 Sinorhizobium fredii NGR234
Q880Z8          100 YQIRADGTAGFSMTTLSVPGY 120 Pseudomonas syringae pv. tomato
WP_011084653    104 HSLSREGKLTVRASKLVVGTT 124 Bradyrhizobium
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