3VB9


Conserved Protein Domain Family
DUF1254

?
pfam06863: DUF1254 
Click on image for an interactive view with Cn3D
Protein of unknown function (DUF1254)
This family represents a conserved region about 130 residues long within hypothetical proteins of unknown function. Family members include eukaryotic, bacterial and archaeal proteins.
Statistics
?
PSSM-Id: 399684
Aligned: 124 rows
Threshold Bit Score: 66.9096
Threshold Setting Gi: 122942714
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
?
Program:
Drawing:
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
3VB9_D         86 GQXGFFN-T---LKqkqGIITANFTTPYVIGTWNLeKTGPLIINLPEA----KX-AGXXLDVHQRVLsdLSLLGP-DKGK 155 Vibrio parahae...
Q7V5N1        101 nEVMLMS-Pl---GsnpIFLTGNTDTVYGSVFFDLsKTGPLVINIPA-----GLgPGTINDAFFRFVadTGAPGP-DRGK 170 Prochlorococcu...
Q7V5N0        115 NQVGLFE-Nl--MSsdsLWLTGNTDTVYASTFLDLn-NGPIVIEVPP-----GMgPGTVNDAYFRFIvdMGGPGP-DKGK 184 Prochlorococcu...
WP_013345633  100 sDVVIFE-Ql--MDarpLFLTGNTDTVYASAMLDLqRDGPTVVEVPP-----GAgPGTVNDAFFRFIidMGAPGP-DRGK 170 Ferrimonas bal...
Q7UUF8        109 sQFMIMD-Rl--LDsnpLFLTGNTDTVYCSGFLDLkRDGPTVVEVPE-----KCgPGTVNDAFFRFVidMGVPGP-DRGS 179 Pirellula sp.
jgi:Caka_1699  71 NDIGYNS-Kl--QDwrfQTATPNNTTPYIHMYWNIe-NGPVVVELPPSeggiGV-FGTLLDAWQRPLddVGAKGR-DRGL 144 Coraliomargari...
EFG04964       42 NQILWWP-Gl--MDwrnQSLTPNPDVIYLMPFFTTe-NGPVVLEIPPAddthKI-NGSVMNYWQAAIedVGPAGL-DAGA 115 Streptomyces c...
Q1QJ57         62 NEIIYWS-Rp--VDwhnQTLTPNPDALYFMIFFNTkEAGPIVIDVPPAdd-gSF-AANIDTVWQMPLedAGPYGA-DKGA 135 Nitrobacter ha...
Q47YR8         75 NKLLHTKkLpteGSd--AVVTPALDHLYSKGVIDL-SNGPVTIEYPEVdegrYY-SIHVTDQEHYTIfd-------kiHP 143 Colwellia psyc...
Q5E117         75 NMMGKTLkLagpEDr--VVPTVNNDTLYSQSHINLnDTGPLVIEIPPTnn-rYF-IVQLLDDYSEAV--GNLIEDnVGQD 148 Aliivibrio fis...
3VB9_D        156 GGKYLIVPPGE-----KYKDlnp-----------kgYYviRPKTNVVYGGIRILE------PDvDRVVKQVVPNITTQP 212 Vibrio parahaem...
Q7V5N1        171 GGKYLILGPSD-----QA-Pses-----------kdYFvfRSPTYSNWLIMRAFLde---nGSpDKAVQSYKSDLHIYP 229 Prochlorococcus...
Q7V5N0        185 GGKYLIVPESY-----SG-Vip------------egYFvaKTPSRINWLILRGFLdq---gGKtDTAINNFQKGLKIYP 242 Prochlorococcus...
WP_013345633  171 GGHYLILPPDY-----QG-PitpsvqgkpqrvdgrdYYvaRSASYINWLILRGLLv----eGKaEPAVTMWREGLKVYP 239 Ferrimonas bale...
Q7UUF8        180 GGKYLILPPDH-----DG-EwvgpiggkateidgetYFvvQSTSWVNWVILRGFLv----dGKpDASAEMFRNGLKVYP 248 Pirellula sp.
jgi:Caka_1699 145 GAKYLLVPPGY-----DG-Kll------------pkALvyEQATNFGWAALRPILpggateENlAKATALTKK-IKIYP 204 Coraliomargarit...
EFG04964      116 GAKYLILPPGY-----TD-Pvp------------lgYTllQSDTYRGYALLRSIPagq-sdSEiADAVAYAEK-IALYP 174 Streptomyces cl...
Q1QJ57        136 GGKYLILPPGY-----ND-Tpp------------dgYIvvRSETFAGYALFRSNLash-seADiAKAAKYGKR-LKVYP 194 Nitrobacter ham...
Q47YR8        144 VGKFTFVRKGKnmevpEGATv------------------iESPGDYPHLFIRVQVkt---pED-LVNALSIQEKITLTA 200 Colwellia psych...
Q5E117        149 GGKYLLVNKGW-----KGVEggip--------dgidGv-iESRTPLVWYIQRTGVsg---dKD-LAAALKIHDGFINYP 209 Aliivibrio fisc...
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap