5W5F


Conserved Protein Domain Family
Phage_T4_gp19

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pfam06841: Phage_T4_gp19 
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T4-like virus tail tube protein gp19
This family consists of several tail tube protein gp19 sequences from the T4-like viruses. This family also contains bacterial members which suggest lateral transfer of genes.
Statistics
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PSSM-Id: 399672
Aligned: 63 rows
Threshold Bit Score: 65.7236
Threshold Setting Gi: 1233034360
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5W5F_A        17 RPNLFQVEI--SYLGqnft--fqckATALPAGIVEKIPVGFm----NRKI----NVAGDRTFDDWTVTVMNDeahdARQK 84  Enterobacteria ...
Q1DB76        12 KRFKFLCEA--DGLG----------HSGFQKCSELSVEVANvqyfeGGSLip-nKSPGRLTFSDVTLERGAT----QDHQ 74  Myxococcus xant...
P13331        13 nTTNFVVSIphS--NttsaftlnaqSVPIPGIRIPVTDTVTgpfglGRAQ----RPGVTFEYDPLIVRFIVDeelkSWIG 86  Escherichia vir...
Q0A7T4        17 RTFKFQILI--DGQP----------VAGLKKMSALKKSTESvawrtAGDPsherQLPGGTSYEAVTLEQGLT----HDPV 80  Alkalilimnicola...
WP_011735715  15 KNMKFRIKW--DGRY----------VAGVSKISALKRSTEVvthreGGDPstsrHSPSLWKFEPITLERGLT----HDPE 78  Pelobacter prop...
Q82QW3        15 KNFKFRVKW--DNRY----------VAGISKVSALKRTTEVvehrdGGDHssarKSPGRTKYEPITLERGVT----HDPE 78  Streptomyces av...
WP_011927250  15 KNFKFRVKW--DGKY----------VAGVSKVGALKRTTEVvkhreGGDPsssrKSPGRSEYEALTLERGVT----HDKE 78  Bradyrhizobium ...
Q1QPZ0        15 KNFKFRIKW--GADY----------VAGVSKISGLKRTTEVvkhreGGDPsssrKSPGRTEYEAITIERGVT----HDVA 78  Nitrobacter ham...
WP_011521669  16 KNFKFRLKW--DGKY----------VYGGSKVSGLKRTTEVvehrsGGDPstshKSPGRTKYEPITLERGLT----QDLN 79  Candidatus Kori...
WP_012285870  15 NNFKFRLKW--NGKY----------VAGVSKVSSLKRSTEAinfreGGDPstsrVQPGQTKFEPITLERGVT----LDLE 78  Caulobacter sp....
5W5F_A        85 FVDWQS---IAAGQGNEITggkp-------aeyKKSAIVRQYARDA-KTvTkEIEIKGLWPTNVGE-LQLDWd-SNNEIQ 151 Enterobacteria ...
Q1DB76        75 LFDWFQdvvHTTSGLGLPDsl-----------yKRNLDIVQQDRDGtTL-R-RWSLSRAWPVKFVA-GEWDN--ESDENV 138 Myxococcus xant...
P13331        87 MYEWML---GTSNYLTGENtaq--------ktgPEYITLYILDNSKtEI-VmSINFYKPWVSDLSE-VEFSYteDSDPAL 153 Escherichia vir...
Q0A7T4        81 FENWAN---LVNNIEGDGGmsl--------rnfRKDIIINVLNLQG-QV-AiSYKVFRAWVSEFQAlPELDAg-TMNAVG 146 Alkalilimnicola...
WP_011735715  79 FEAWAN---LVYSTQGDMAisl--------knfRKDLIIELLNEQG-KV-AkAYKVYRCWVSEYQGlPELDA--NGHAIA 143 Pelobacter prop...
Q82QW3        79 FEAWAN---KVWNYANAQAapdqrdrevslagfRKDLVIEVYNEAG-QK-VlAYQVFRCWVSEYQAlPDLDA--NANAVA 151 Streptomyces av...
WP_011927250  79 FEQWAN---KVWNFGAGLGqevs------lkdfRKDIIVEVYNEAG-QL-AiAYKIYRCWVSEFQAeADLDA--NANAVL 145 Bradyrhizobium ...
Q1QPZ0        79 FEQWAN---KVWNYGSGLGkevs------ladfRKDLVIEVYNEAG-QA-AvRYKVFRCWVSEFQSmSDLDA--NGNAVL 145 Nitrobacter ham...
WP_011521669  80 FHDWAG---KVWNFGAGLGsevs------ladfRKEIYLEFYNEAG-QV-VmAYKIFRCWVSEYQAlPDLDA--NANAIA 146 Candidatus Kori...
WP_012285870  79 FESWVR---QVWNFRAGLGmess------lasfRRDITLEFYNDAG-QL-VyAYNIYRCWPSEYEAlPELDA--SANAVA 145 Caulobacter sp....
5W5F_A       152 TFEVTLALDYWE 163 Enterobacteria phage T4 sensu lato
Q1DB76       139 IESVTLTYDSFE 150 Myxococcus xanthus DK 1622
P13331       154 VCTATIPYTYFQ 165 Escherichia virus T4
Q0A7T4       147 IQTITLQHEGWQ 158 Alkalilimnicola ehrlichii MLHE-1
WP_011735715 144 IEHMVVQNEGWE 155 Pelobacter propionicus
Q82QW3       152 IQQLKLENEGWL 163 Streptomyces avermitilis
WP_011927250 146 IQSIKLENEGWE 157 Bradyrhizobium sp. ORS 278
Q1QPZ0       146 IQHLKLETEGWE 157 Nitrobacter hamburgensis X14
WP_011521669 147 IEHIKLENEGWE 158 Candidatus Koribacter versatilis
WP_012285870 146 IQTLVLQNEGWE 157 Caulobacter sp. K31
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