6MJP,4B54


Conserved Protein Domain Family
LptC
?
pfam06835: LptC 
Click on image for an interactive view with Cn3D
Lipopolysaccharide-assembly, LptC-related
This family consists of several related groups of proteins one of which is the LptC family. LptC is involved in lipopolysaccharide-assembly on the outer membrane of Gram-negative organizms. The lipopolysaccharide component of the outer bacterial membrane is transported form its source of origin to the outer membrane by a set of proteins constituting a transport machinery that is made up of LptA, LptB, LptC, LptD, LptE. LptC is located on the inner membrane side of the intermembrane space.
Links
?
Statistics
?
PSSM-Id: 429144
Aligned: 42 rows
Threshold Bit Score: 103.093
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
?
Program:
Drawing:
Aligned Rows:
Download Cn3D
PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection: 
6MJP_C   8 YVLLLFIASWSLYYLLGQEQDsk----iQVAPNLELPMFSGENLENISYDEQGI-RNYVITSIHLDHYA-KSGNTLFKAP 81  Vibrio cholerae
Q3SLC6  11 LAILLLLAALSFAIERAVQVTp-----aPEHAAESDPEGIMENFDALRTDATGR-PQYRLSAKRLKHYT-GSRLTELELP 83  Thiobacillus denitrif...
Q82Y24  13 LTVLLLLTLWLDKNLQRPDSQ-------QDSGTQQEIDYIIENLDGIQINHELK-VNRFFSADKLTHYP-VGDITQLEHI 83  Nitrosomonas europaea
Q2YCX5  11 FVIVALFASLLTLLNQDGPTPll----aPESISVRAPDYVVEDFSAIRTDENDA-GYKMLLGKKMVHYP-DDDSAELEQP 84  Nitrosospira multifor...
Q2LSM5  26 AVLCFAVLSIVSGVIYKVSGNrpq--ktLLKIMDSTVDLQVMNVHYTEATDEG--VKWEIKADSAQYRK-KENLAVFKNP 100 Syntrophus aciditroph...
Q74BY8  20 LYLVASLAIRLVGGNEKEAGL---------PKLPRNIDLSLKTLHYAE-TREGV-KKWDLYADRGEYDR-QRDVTLLTGV 87  Geobacter sulfurreducens
Q8F3J5   8 rilvFLISVVCGFFLIIFENCkkvnyerVEKERESGSSISIRNFKREAYDSSGQ-LQWELRANESFVYV-NENKTTFYDI 85  Leptospira interrogans
Q31H03   9 LLFVAALVVLTIAFKQSVNRDst---svQTKPLALTHSWQIFKSTSWQVSKQDPnTKQTVIYSDEVFYQnETKQSRFKNP 85  Hydrogenovibrio cruno...
Q9A926  44 AATVIVQAAWRSLASSKLQTQ------------AATAPLVLDKPRFTGVLKDGR--PFLITAERAERDAkDQNIVRLTAP 109 Caulobacter vibrioides
Q5NG31  15 sIIVIIFSMLYISYNALDGGKp-----lKNIPQKNRVELKAFDFNYNKYDSSGN-LAMSFFAKELQRYL-NQD-LYMTDI 86  Francisella tularensi...

6MJP_C  82 ILKVYREGTl-QEWEITARRGILSK-DQVLTLYDDVLAKNLLPDSG--------------FDTLTTSEMSIQLKSRDFWA 145 Vibrio cholerae
Q3SLC6  84 RFVQIDPEA--GEIRAAAREATISPtGDEVDLRGDVNVVRAAHAGQs-------------AMTLRTARLLVFPEQDQLRS 148 Thiobacillus denitrif...
Q82Y24  84 GLVSIEPDK--PLLRVTSGRAELAGgDNDIFLTRNVAIIRGEDKDKd-------------KVTMLTDFLHLIPDTDIAKT 148 Nitrosomonas europaea
Q2YCX5  85 RLITIEPGK--PSVQLQADNAKMSAeGEDIYLSGNVVIVRNAGKGRg-------------ETILTTSLLHLIPDQDIART 149 Nitrosospira multifor...
Q2LSM5 101 CIKLIMPNG--RVYVMTGNEGFVHQdSKDMEISGNINLTSSn------------------GDEFKTNHLSYSGIEKRCYT 160 Syntrophus aciditroph...
Q74BY8  88 RIVFPGTDKt-GEITLRSDKAEYFNaTKDVTLTGNIHARSTs------------------GMEFTTGRASYRASRQLVVT 148 Geobacter sulfurreducens
Q8F3J5  86 DFDQYEAGK--FKSKLLAEKGEINHkTRLMLLEGKILLKTD----D--------------HKILTAKTMEYNMDTKKLVS 145 Leptospira interrogans
Q31H03  86 YIIQDKET---SAYTIKSQQGQSIN-DQSVHFNGDVVIQMIEKQTPs------------eNKTLKSEQISYNTLSETLTS 149 Hydrogenovibrio cruno...
Q9A926 110 LLVRGYGEP--NPSQATAKSGVYREaENTLLLTDEVKITSAe------------------GFDFDAPRALIDLRTGAVSG 169 Caulobacter vibrioides
Q5NG31  87 TEKSYDKATekLDWQVQAKHAQQLAnQNLIHLYDGVNAIMITKKSAantqktsdndstpdKIYIKSSEMFYNSSSKDFYN 166 Francisella tularensi...

6MJP_C 146 DKPVELRGPQF--ETHGQAMKGNFADHSAELYNQVQGRYE 183 Vibrio cholerae
Q3SLC6 149 PGPVDIRDDLL--TVRAGAMHYDARLRVIKLSGRVHTRYL 186 Thiobacillus denitrificans ATCC 25259
Q82Y24 149 DQPVTVTRMNS--VINAIGLFMNNQTGEILLQSRVTAHDD 186 Nitrosomonas europaea
Q2YCX5 150 DKPVEITETNA--TIRAIGMEMNNRTGHTELLSQVKVVHD 187 Nitrosospira multiformis ATCC 25196
Q2LSM5 161 PAPVTMKNSRI--QVDAKGMSLSLKDEQLTLLSGVRAVLN 198 Syntrophus aciditrophicus SB
Q74BY8 149 DDRVSFRDARF--AVEGVGMEFLVPTRTLRILNDVRATIA 186 Geobacter sulfurreducens
Q8F3J5 146 DSEVSISADGT--TIRGIGLRADKDLNKFTILKptaitqg 183 Leptospira interrogans
Q31H03 150 KVYTEITEPGL--IMSGIGFKANMASGKYRFLSDVKTVYQ 187 Hydrogenovibrio crunogenus XCL-2
Q9A926 170 DAGIAGSGPKG--STRASAYEVTDKGDRVVLKGGVRTRLE 207 Caulobacter vibrioides
Q5NG31 167 NRFTKMYDPKTgnNTTGTGVKGNSETKIIELSQNVRSYYA 206 Francisella tularensis subsp. tularensis
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap