Conserved Protein Domain Family
KorB_C
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pfam06613: KorB_C 
KorB C-terminal beta-barrel domain
This family consists of several KorB transcriptional repressor proteins. The korB gene is a major regulatory element in the replication and maintenance of broad host-range plasmid RK2. It negatively controls the replication gene trfA, the host-lethal determinants kilA and kilB, and the korA-korB operon. This beta-barrel domain is found at the C-terminus of KorB.
Links
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Statistics
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PSSM-Id: 429032
Aligned: 6 rows
Threshold Bit Score: -1
Created: 27-Apr-2021
Updated: 29-Sep-2021
Structure
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Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
Q0VMS5            298 DPTRISNPTLWVSWDmegeRYTGKVMLARRPSSTGMLWVEEQDTGRAFELVAADVTLEGLTE 359 Alcanivorax borkumensis SK2
WP_012806730      288 DPDRLRRAIVHVQHD----GRPARLILNRRPPVEGHAWLKYDDDGHELAADLAQVQLVALLE 345 Candidatus Accumulibacter ph...
WP_011798725      297 DPDKLKKAIIQVKHD----DRPARLILNRRPPAEGWAWLKYEDDGQEFEADLGTVQLVALLE 354 Acidovorax sp. JS42
CCE25735          291 DSDKLKKAIVRVLHD----GRIARLVLSRRPTQDGYAWVKYDDDGNEFETDLGSVQLIAVLE 348 Methylotuvimicrobium alcalip...
1_pfamImport        1 DPMKVRKPLVQVRVG----RREGVMLIGKTAEY-GLAWVKF-DNGDEEQLDVNKVKLVAVID 56 
jgi:Mrad2831_6342 318 DPDSMKRPLLLVEHD----GRAAAVLLNRRPSSAGLIRIRYEDGGGDAEVDAGSVKINRLME 375 Methylobacterium radiotolera...
WP_012806730      288 DPDRLRRAIVHVQHD----GRPARLILNRRPPVEGHAWLKYDDDGHELAADLAQVQLVALLE 345 Candidatus Accumulibacter ph...
WP_011798725      297 DPDKLKKAIIQVKHD----DRPARLILNRRPPAEGWAWLKYEDDGQEFEADLGTVQLVALLE 354 Acidovorax sp. JS42
CCE25735          291 DSDKLKKAIVRVLHD----GRIARLVLSRRPTQDGYAWVKYDDDGNEFETDLGSVQLIAVLE 348 Methylotuvimicrobium alcalip...
1_pfamImport        1 DPMKVRKPLVQVRVG----RREGVMLIGKTAEY-GLAWVKF-DNGDEEQLDVNKVKLVAVID 56 
jgi:Mrad2831_6342 318 DPDSMKRPLLLVEHD----GRAAAVLLNRRPSSAGLIRIRYEDGGGDAEVDAGSVKINRLME 375 Methylobacterium radiotolera...
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