Conserved Protein Domain Family
TraK

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pfam06586: TraK 
TraK protein
This family consists of several TraK proteins from Escherichia coli, Salmonella typhi and Salmonella typhimurium. TraK is known to be essential for pilus assembly but its exact role in this process is unknown.
Statistics
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PSSM-Id: 399530
View PSSM: pfam06586
Aligned: 36 rows
Threshold Bit Score: 129.031
Threshold Setting Gi: 123771615
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
jgi:Ajs_1539  59 VLAVTALSLGLHA--HALQ----VVEASDGVAVEAIVSLKEPTRIRIEGAAITDVfgnihsshcgggapaisaapntpss 132 Acidovorax sp. ...
Q5ZTS1         5 AMIFSLGLLIATA--EGAQ----IKTVRNYEDIFINASIKEPNNLMLEDDRIQQI------------------------- 53  Legionella pneu...
Q3IUW7         6 MSAALAAVVASAV--HADQ----RLTTRPNGSVRISASAEEVTRISVAGDRIRRI------------------------- 54  Rhodobacter sph...
WP_013481208  11 AMMMAASAGAETLnvKGDQ-------------ALLQVSSSQMSRIHIQGERIATVrt----------------------- 54  Asticcacaulis e...
Q7MBN6        21 itlvLAFFIAPFA--MAQNvgkvSYEFNEGDTIPLALSSININRLVVKNDRILSI------------------------- 73  Vibrio vulnific...
Q6LW92         7 FAIIIAGCVSATA--HAKNtpgtTYTFNDNDTVPVILSSVDINRLVVKNDKITGI------------------------- 59  Photobacterium ...
CCB87837       5 isYFCAALSASPL--LALT----EVEFDPKTTPEVALSISSPNRITFEGGEITNV------------------------- 53  Simkania negeve...
Q6MBA1         5 FWMGFACLQVLKL--SAAT----YHTLNTTSLLPCYLSSTYQNRVMIENGRIKKVi------------------------ 54  Candidatus Prot...
CAX53644      11 AGALLTPAAMAAV--SGPT----GTVFENDAHLKAQLSNTSPNKIVIDGELITRV------------------------- 59  Erwinia billing...
Q93GP0        19 SGLVMASGSGTLA----PV----VVSLANGGQANIAVSNTDPNLFTVPGDRITAV------------------------- 65  Salmonella ente...
jgi:Ajs_1539 133 tpglaspasitsssVNPAGDVIVEC---------DRDKGEVYIRpag--dalRPINLFVSSA-TATYTLLLRRSDTPADT 200 Acidovorax sp. ...
Q5ZTS1        54 --------------KAPGNTLVDACngkanckliDDTTGILTFlpsp-lyhtRAFTINLLTEkGLFYNVRVEPKPIASQT 118 Legionella pneu...
Q3IUW7        55 --------------IKDQTSFQEMN---------DETTGDVFLryagdkaklVPETGYILTErGVTISYELTPSARLGAE 111 Rhodobacter sph...
WP_013481208  55 ------------iqGGDGAELLIEK---------DETTGDVYVGfdgd-tsgQSFSAFLTTEsGKTVQATFHPVDDTAKT 112 Asticcacaulis e...
Q7MBN6        74 --------------VCPKGFCTSSGn-------qKDASGSITLKin----iaLPFTAHLTTEkGRLFALFITPKSTPALV 128 Vibrio vulnific...
Q6LW92        60 --------------DCPAGFCVVSGt-------kTDTSGSARLKln----isVAFVAYVSTQkGRQFGMFITPQAIPGIT 114 Photobacterium ...
CCB87837      54 --------------RFDQNRFQAAI---------DEKTGEVFISpla--eivIPSSITLRTSsGKSQTLNVTAQEGPGEV 108 Simkania negeve...
Q6MBA1        55 --------------TPESDRLSIQI---------EELTGQAFIFard--phlKEISLSVISDsGVIQDIHICFIERQPEV 109 Candidatus Prot...
CAX53644      60 --------------TGPENAF-TQE---------NTEDGALLItpv----tgQNFTLFLETAgGVGASIDVVPKPGDGKT 111 Erwinia billing...
Q93GP0        66 --------------SGLDGMLTNSE---------QTGTGGVVVatv----skKPFTFILETErGLNFSVRAVPRAGAGRT 118 Salmonella ente...
jgi:Ajs_1539 201 IVIRDKTpqaLRPGGPEAAPSGPAPsh---------vrAMKGLLVAMS--------SNrvpadvrveEASKPVQLWTEA- 262 Acidovorax sp. ...
Q5ZTS1       119 IVFKSYRnpvIRARAPHTSS-------------------YEKVMVGFLra----lvNGylpe--gftqTIPKNPSVYKAq 173 Legionella pneu...
Q3IUW7       112 TVLISVAgmpPEGATAGAAPAAEARsegfelaggegggGYASGLVAFTra----tiDKhiagkaapkRSHGSVVGSESGt 187 Rhodobacter sph...
WP_013481208 113 FELKLEG---TLSASSPAALQFKRN-------------GYPETMAAFVkl----mfNPdrp---dgvVCRQGRAQPTQTt 169 Asticcacaulis e...
Q7MBN6       129 TEFVWSEsykEQKSPIALAADYPA------------------AMTALTksmmrfvhDGspiagfkrhDVDPKTLPKDEAk 190 Vibrio vulnific...
Q6LW92       115 SEFIGVQntqHTPSVFEKKAPYTT------------------QLAEFTaqmirwtnTGemmggfslhPVDPKTVTNTLTa 176 Photobacterium ...
CCB87837     109 VYLCEKS---HQTKTSTNQVLPLST-------------DFHSKTIELLnd----ilSYkepkgygpkELKNEQFPLTPp- 167 Simkania negeve...
Q6MBA1       110 VVLQEPE----QKECSPGVPAAEEL-----------------SILKQVqe----ivAGriptgyrhkSISSQKRTLKKg- 163 Candidatus Prot...
CAX53644     112 LRLIPAS---SRLKANPDAKAWEESq------------PWEKTLVSVArt----vvNGgvpdsytelPADRG-PAYAPAs 171 Erwinia billing...
Q93GP0       119 VQLV--S---DLRGTGEEAGAWETAt------------PYESLLVAVSqa----vrGGtlpagwyqiPVTKE-ALQAPAg 176 Salmonella ente...
jgi:Ajs_1539 263 --RFTLLRRYEGRGYVGEKYALQNVSLAPMVLAEQEFDRPDsraggeITGIAIEHH--NLRPGETTSVY 327 Acidovorax sp. JS42
Q5ZTS1       174 ktQLKRLLTVNGNRMRGEIFELKNVTNQPIDAKESWFNWPG------TKGVALAKT--HLAPFETTRLY 234 Legionella pneumophila sub...
Q3IUW7       188 gmRAKVI--------------VAAGGRGGRYVRPQDFYTSK------VLGVWVQRN--ALGPSDHAWVV 234 Rhodobacter sphaeroides 2.4.1
WP_013481208 170 nfRVWTIERCDAEGIAGTVLHFKNISTVPQTLSADGFLVRQ------VLAVGITDE--LLSPGEEARVY 230 Asticcacaulis excentricus
Q7MBN6       191 -lAIIPQTVFVGSDYSGVIYQLKNQGNQEMVLTTAQFYSDS------ARSAALDAY--HLAPGQTTTLY 250 Vibrio vulnificus YJ016
Q6LW92       177 rlAVIPDTIFVGNTFSGIRYKLKNNTTTTQTLTTAQFYSRA------ARSAALSTD--QLAPNDTAWLY 237 Photobacterium profundum
CCB87837     168 -lESTPIYLYEGPFDTLLVLSVENRSNNRVLLDLATLKSPQ------ERWVFCQKN--CLKEREKMLmv 227 Simkania negevensis Z
Q6MBA1       164 -iELTLKAKFIGSENTLYLYQLANTGKQPQTVLECEMGSQQ------SQWIYLEQN--MIAPKQTKVCi 223 Candidatus Protochlamydia ...
CAX53644     172 gvTLTPERQLAGSHLRVMRYRMKNGGYVTRELSEKQFWQQG------VRAVLLSTR--SLYAGGEGYVW 232 Erwinia billingiae Eb661
Q93GP0       177 -lSARADAVWTGNHLKLVRFAVENKMPSALNIRESDFWQPG------TRAVMFSQPvsQILAGARMDVY 238 Salmonella enterica subsp....
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