Conserved Protein Domain Family
Phage_antitermQ

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pfam06530: Phage_antitermQ 
Phage antitermination protein Q
This family consists of several phage antitermination protein Q and related bacterial sequences. Antiterminator proteins control gene expression by recognising control signals near the promoter and preventing transcriptional termination which would otherwise occur at sites that may be a long way downstream.
Statistics
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PSSM-Id: 399498
View PSSM: pfam06530
Aligned: 33 rows
Threshold Bit Score: 134.269
Threshold Setting Gi: 499066601
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_038241585              1 MRDIQQVLVLWGGWTTSDvNLK-VGWSPVAAGFSGLLPASGTSRPTCSDEDGLIIDICVARLRARGrEEEFDYIKQHYML 79  Xeno...
WP_047780281              1 MRDMQMVLERFGGWVANN-HED-VAWAPIAAGFKGLIPNKIKSRPQCCDDDGMILNGCMSRLNQSR-PDAHDLLLDYYVF 77  Prag...
CCH:MU9_2675              1 MSNIQMILERWGAWVADN-PES-VTWSSIAAGFKGLIPVKVKSRQQCTDNDALVISGIMAKLNIRN-SDMHDLLFDYYVF 77  Morg...
CAR42188                  1 MQKISKLMEAWGSWVV---NNN-LYINTLTINKRENVPIRVKLRKACTDRQGIIVSVCMSKLLKNH-KKDYELLVDYYVF 75  Prot...
WP_045957936              1 MRDIQLVMERWGAWAADN-RED-VYWSSIAAGFKGLIPNKIKSRPQCCDDDGVIIAGCMATLNKKN-SEDHNLLFDYYVF 77  Xeno...
utah:Sant_2913            1 MRDIQQVLERWGAWAANN-HED-VYWPPIAAGFMGLIPSKIKSRTQCTDDDGLVISGIMAGLRSKQ-PATHDLLFDYYVF 77  Soda...
PRJNA272881:AV903_03715   1 MRDIQQVLERWGAWAADN-QED-VCWPSVAAGFSGLIPSKVKSRVQCCDDDGVIISNIMAGLLSKH-PVAHNLLFDYYVF 77  Erwi...
EHD21298                  1 MRDIQQVLELWGAWVADN-PCE-VYYAPIAAGFKGLIPNKIKSRQQCSDDDGLIISSCMALLNKKN-QDDHDLLFDYYVF 77  Bren...
Q47274                    1 MRDIQMVLERWGAWAANN-HED-VTWSSIAAGFKGLITSKVKSRPQCCDDDAMIICGCMARLKKNN-SDLHDLLVDYYVV 77  Esch...
KKF37051                  2 RRDMQEVLERWGRWAASEeYCSlIDWPSLSVTPGGFLRR--SSRPGCSDEDGAAIDTCVAHMSLVRdAKDILILGQRFIG 79  Erwi...
WP_038241585             80 GYSKREIARDLRVSESLVRHKMQVAESFIAGCLEMLDIQLD 120 Xenorhabdus szentirmaii
WP_047780281             78 GLTFMKLAEKHHCSDGHIGKKLQNAEGCIEGMLMHLGVKLE 118 Pragia fontium
CCH:MU9_2675             78 GKTFIRLAKKYGCSDTHIGKKLQKAEGLVEGMLIMGDVKLE 118 Morganella morganii subsp. morganii KT
CAR42188                 76 GQTFIQLAQAHRCSDTYIGKKLKKAEGIVEGMLIMAELIFI 116 Proteus mirabilis HI4320
WP_045957936             78 GKTFMQLARDHHCSDTHIGKRLQKAEGVIEGMLMMLDVPLE 118 Xenorhabdus poinarii
utah:Sant_2913           78 GKTFMTLATEHHCSDTHIGKKLQNAEGVVDGFLMAMEIKLD 118 Sodalis praecaptivus
PRJNA272881:AV903_03715  78 GKTFMQLASEHHCSDGHIGKKLQNAEGVIDGYIMALEIKLE 118 Erwinia tracheiphila
EHD21298                 78 GKTFMQLASKLHCSDTHVGKRLQKAEGTIDGMLMALDISLE 118 Brenneria sp. EniD312
Q47274                   78 GMTFMSLAGKHCCSDGYIGKRLQKAEGIIEGMLMALDIRLE 118 Escherichia coli K-12
KKF37051                 80 GHTTRHIAENMSLDRNAVRKSLVASEEFLEGCLVAMGVRLD 120 Erwinia tracheiphila
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