2XRH


Conserved Protein Domain Family
DUF1104

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pfam06518: DUF1104 
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Protein of unknown function (DUF1104)
This family consists of several hypothetical proteins of unknown function which appear to be found largely in Helicobacter pylori. The structure of HP0721 protein consists of a bundle of four alpha-helices connected by loops and stabilized by hydrophobic interactions. It has been suggested that this protein might represent a novel H. pylori.
Statistics
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PSSM-Id: 428986
Aligned: 10 rows
Threshold Bit Score: 79.373
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2XRH_A             10 DFSKTSDEDLAKMAGVVAPQDIVDYTKELKKRMEKMPE-DKRKAFHKQLHEYATKNTDKMTVADFEARQKAVKEALKKgN 88  Helicobact...
CBG39415           18 DFSKMSNDDLAKMAGTVDAKDFADYHMELHKRMHGMSK-DQMKDFAKEIREYREKNTDNMTLKEYREQREKIKEALEQ-K 95 
CCB80209           26 SFKDKSNQELIEMAGKVVPNEVPDYQMELFKRMKGMSA-EQKKKFHEQLKEAADKNTENMTMEEFEKRREAIRAAIKA-R 103
tigr:CHAB381_0527  20 DFSGKSSDELIKSLNTKDPVVFADAMFELRKRV------GEQNKIIFKMRSAMCEQMSSKTPEERFKFKGEVHKAMSD-K 92 
Q7MSV3             22 DFSKKSNAELQSMAGSVAPKEVLDFKSEIHKRTQKMTV-AEARTFHQGMQKAMQEKMSKMTMEEAQKYHNEVRLEVQK-Q 99  Wolinella ...
CCB80208           22 DYSSLSGPELIKLAGKVPAEDALELRAAVHKHVESLKTaKAKNSFKWKFKQAAEAHFKKMKKKDFVAMREEVRKEFEE-A 100
O24943             23 DFKSMDDKQLLEQAGKVAPSEVPEFRAEVNKRLAVMKE-EDRKNYKADFKKAMDKNLASLSQEDRNKRKKEILEAIAN-K 100 Helicobact...
EFR46909           26 DFSKKSDKELISLSGVVKVEEFADYELEIAKRMKAKSE-KEAKDFREKLKAQYEKATENMSVKEYREYKKATHEAMKK-R 103
Q7VFM1             25 DFSSRSDAELVKLSGIVKVEEFVDYELEVAKRLKSKTE-KEAKEFKSKLKEQYEKATEKLSVKQYREYKKATREAMKK-H 102 Helicobact...
WP_006655071       24 DFSKKSNDELINLSGKVTPKDYPDYKMEIHKRTQGMTL-QEARNFREQLRDKRQSVYDQMTLKEYREYRDAIAKETAK-R 101 Helicobact...
2XRH_A             89 MEDMD 93  Helicobacter pylori 26695
CBG39415           96 VKGMS 100
CCB80209          104 IAKMT 108
tigr:CHAB381_0527  93 IEKLS 97 
Q7MSV3            100 LDSMT 104 Wolinella succinogenes
CCB80208          101 TKEHS 105
O24943            101 KKTMT 105 Helicobacter pylori
EFR46909          104 VENMS 108
Q7VFM1            103 LEKMS 107 Helicobacter hepaticus
WP_006655071      102 IDSMS 106 Helicobacter canadensis
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