2PJU


Conserved Protein Domain Family
PrpR_N

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pfam06506: PrpR_N 
Propionate catabolism activator
This domain is found at the N-terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate.
Statistics
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PSSM-Id: 399486
Aligned: 85 rows
Threshold Bit Score: 117.612
Threshold Setting Gi: 122997208
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2PJU_A         37 HLANITPIQLGFEKAVTYIRKkL--AN-ERCDAIIAAGSNGAYLKSRL-SVPVILIKPSGYDVLQFLAKAGKLT-SsIGV 111
Q8RDX0         24 DTEDVILVETTISNALEEAKN-Li---dEGVKVILTKLAIKIKIEDKV-EIPVLSIENNISDYIELLKEIDIKN-NrIAF 97  Fusobacterium ...
JLU:CLAU_2447  28 nNKKIDVFIKKLDEALVFSKE-L--IS-KGARIIISRKGTTEILKQHL-DIPTVNIDTTLSDYIPIMEKVIKIKgK-IAF 101 Clostridium au...
CDC68749       28 rELSIPVYTAVLEDAVTLAKD-M--IQ-QGTWLFISRGVTRELLEHTT-QTTVVKVPVLASDYIPVFEKIQHIQgL-IAF 101 Oscillibacter ...
CBK98617       28 rgMDVRVEVAELEAAVSLAKL-L--LT-QNDYLFISRRGTRDLLRKSL-NIQVVNIPGEASDYIPAIQQLRHERgL-IAF 101 Faecalibacteri...
CBK75950       36 LESHISVTEATGEQTLSCALE-Y--AR-AGSRIFICRGRNTSLIEHHV-SVPVINVPYLYEEIYSSFEAAGAPP-EqVAM 109 [Clostridium] ...
CDD42507       37 LENHITVTEATGERTLKLALQ-F--AR-EGSRVFISRGRNTKLIERHV-SVPVINVPYLCEEIYSSFLAAGAPP-ErVAM 110 Clostridium sp...
WP_014827292   25 LNINVSIVEISFESAVSLVKD-IisQDpNRIKVVLSGGATLELLRQALpSTPMISIHPTEWDIVLALDLARTFGkE-LGL 102 Desulfosporosi...
WP_006718776   25 FDLNIIVRETTFEDAVHVARN-MisQNpDRLALIASGGATLKLLRQDFgSLPWVNIYPTEYDLALALEQAKKLRcK-IGV 102 Desulfitobacte...
Q24UK7         25 YDFKIDAYEATFDDAVELIRG-KvaHReHWDPIIATGGATLGLLRDNLgRMPWVNIFPTEYDLVIALEQAKKTKkT-IGL 102 Desulfitobacte...
2PJU_A        112 VTYQE-TIPALVAFQKTFNLRLDQRSYITEEDARGQINELKANGTEAVVG-AGLITDLAEE---AGMTGIFIYS-AATVR 185
Q8RDX0         98 VDYIE-APESLVDLSKIISNDIVFKTFTSEEECEAIVKELKNKSYSILIG-SVLTKKYANK---YDLKSYEVEIsKNSYS 172 Fusobacterium ...
JLU:CLAU_2447 102 FSYSE-ISNDVKTMCYLLNIDADYYTFNTFKDCEMCIKNAMVKNIVLGIG-GTSTEYFARK---YGLNHIVVESsPTSVK 176 Clostridium au...
CDC68749      102 FASEP-ISDELQTICYLLNISMRQYQFSDTTSCRACMQQAVKDGAVWGVG-GVVSAQYAQE---AGLPYTVTESsDSAIF 176 Oscillibacter ...
CBK98617      102 FSFEEeISNELRTICYLLDLKMKHYCFSDSLSCQSAVQQAVADGAAWGLG-GVVSERFAKL---YDLPYLRVESsDTSIL 177 Faecalibacteri...
CBK75950      110 VGFDK-AHDIMRTFRRISGLDVQLIEPKSPDTIMDELKTALRPGTEALIG-GFSVKRAIEAireLGLRHIPLMVePSNIS 187 [Clostridium] ...
CDD42507      111 VGFDR-AYNIMKTFRRISGLDVQLIEPQSPGTVIKELREKLRPGTEALIG-GFSVKRAISEiqdLGLRHIPLTVePSNIS 188 Clostridium sp...
WP_014827292  103 FVAGTeDPKIIKKLSTVLGLAVKIYVYRTWEELEDQMKRARRDRIQVVLGvGEKIQDLVNQ---FGLHFVSVSAgEKTIK 179 Desulfosporosi...
WP_006718776  103 FFAEQeKIWIINTIASVLGFPVNVYVYRDWLELLTQIEKARHDRIELVIGaGEKIAAVVEQ---NGMQYISVMGgENTIR 179 Desulfitobacte...
Q24UK7        103 FNPGQiDTEAIKAVCSAIQIDAHIYRYNSWKEVLVQVEKAYQDGVEVAIGaGEKISSAVER---KNIQYVSVTSgEYTIR 179 Desulfitobacte...
2PJU_A        186 QAFSDALDMTRMSLR 200
Q8RDX0        173 MYIEIAEQIIKFTDL 187 Fusobacterium nucleatum subsp. nucleatum
JLU:CLAU_2447 177 KAIEVAEQLLKVKNR 191 Clostridium autoethanogenum DSM 10061
CDC68749      177 QAIETACQLCQLQKE 191 Oscillibacter sp. CAG:155
CBK98617      178 HALDTAQQLYVTQQE 192 Faecalibacterium prausnitzii L2-6
CBK75950      188 LAIDSALSILSSMER 202 [Clostridium] cf. saccharolyticum K10
CDD42507      189 LAIDSALNILASMDR 203 Clostridium sp. CAG:299
WP_014827292  180 NALIHAKAFLEAKir 194 Desulfosporosinus acidiphilus
WP_006718776  180 AALGRAKAILEAKRR 194 Desulfitobacterium metallireducens
Q24UK7        180 RAFKYAQLLVDLKRN 194 Desulfitobacterium hafniense Y51
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