Conserved Protein Domain Family
DUF1086

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pfam06461: DUF1086 
Domain of Unknown Function (DUF1086)
This family consists of several eukaryotic domains of unknown function which are present in chromodomain helicase DNA binding proteins. This domain is often found in conjunction with pfam00176, pfam00271, pfam06465, pfam00385 and pfam00628.
Statistics
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PSSM-Id: 368921
View PSSM: pfam06461
Aligned: 14 rows
Threshold Bit Score: 221.475
Threshold Setting Gi: 300152290
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
NP_001190884  814 KPRTVTRPYRKRAR-DNSEEI-PLMEGEGRYLMVLGFNETERDIFLRTFKRYGA---GNFDWKEFV-NPLYMKTYDEINK 887  thale cress
Q9S775        919 GVQTGRRPYRRKGR-DNLEPT-PLMEGEGRSFRVLGFNQSQRAIFVQTLMRYGA---GNFDWKEFV-PRLKQKTFEEINE 992  thale cress
XP_002515445  931 GTQSGRKPYRKRARvDNMEPI-PLMEGEGRSFRVLGFNQNQRAAFVQILMRFGV---GEYDWKEFA-SRMKQKSYEEIRD 1005 castor bean
KRH52359      931 GITTARRPYKKKARtDSTEPL-PLMEGEGKAFRVLGFNQNQRAAFVQILMRFGV---GDFDWKEFT-SRMKQKTYEEIKD 1005 soybean
XP_002869306  861 KPRTVTKPYRKRNR-DKS-EL-PVMEGGGKSFEVLGFNRTEREIFLRTFKRYGA---GNFDWKEFI-HPLHMKTFDEINK 933  Arabidopsis l...
RID77703      894 GNQMAKRPYHR-TR-DTLEPI-PLIEGEGRFLKVLGFNELQRKKFLTTLERYGV---GNYDWKEFV-DPLKPRTYDEIRS 966  field mustard
EKC37026     1327 EDSEKNKRGSRQRGsEKDRPLpPLLARVNGQIEVLGFNARQRKAFLNAVMRYGMppqDAFNSQWLV-RDLRNKSEKVFKA 1405 Pacific oyster
XP_003245819 1379 aGKKLKRKPERKE--ERDRPLpPLLARVGGNIEVLGFNARQRKAFLNAIMRYGMppqDAFNSQWLV-RDLRGKSEKNFKA 1455 pea aphid
XP_015781829 1186 TEEKTGRRKGRNEKtEKDKPLpPLLARVGGNIEVLGFNARQRKAFLNAIMRYGMppqDSFNSQWLV-RDLRCKSERNFRA 1264 two-spotted s...
XP_009915543  264 eGQSGRRQSRRQLKsDRDKPLpPLLARVGGNIEVLGFNARQRKAFLNAIMRWGMp-pQDAFNSHWLvRDLRGKSEKEFRA 342  white-tailed ...
NP_001190884  888 YGILFLKHIAENPTDNSTNFkvitamvyADGVPKEGISSDELLVSMTFMMLVKEKCQFLDNHPTAPVFSNY 958  thale cress
Q9S775        993 YGILFLKHIAEEIDENSPTF--------SDGVPKEGLRIEDVLVRIALLILVQEKVKFVEDHPGKPVFPSR 1055 thale cress
XP_002515445 1006 YGILFLSHIVEEI-TDSPNF--------SDGVPKEGLRIQDVLVRIAVLLLILEKVKFASEKPGIPLFTDD 1067 castor bean
KRH52359     1006 YGTLFLSHIAEDI-TDSATF--------TDGVPKEGLRIQDVLVRIAVLLLIRDKVKFVSQHPQTPLFSDD 1067 soybean
XP_002869306  934 YGILFLQHIAENSKNNSSTFsvisamvsADGIPKEGIRSDELLMSMTFMMLLKEKCQFLDDHPTEPVFRDY 1004 Arabidopsis lyrata sub...
RID77703      967 YGLRFLKHIVEDKDVNSPTF--------SDGVPKEGLKCKDVLARIASVMLVQKKVKHMEANPTNPVFSDR 1029 field mustard
EKC37026     1406 YVSLFMRHLCEPGADNAEAF--------ADGVPREGLSRQHVLTRIGIMSLVRKKVQEFEQINGLHSMPYi 1468 Pacific oyster
XP_003245819 1456 YVSLFMRHLCEPGADNSENF--------ADGVPREGLSRQHVLTRIGVMSLIRKKVQEFEEINGFYSMPEL 1518 pea aphid
XP_015781829 1265 YVSLFMRHLCEPGADHLETF--------ADGVPREGMSRQHVLTRIGIMSLIRKKVQEFEHINGIQSMPip 1327 two-spotted spider mite
XP_009915543  343 YVSLFMRHLCEPGADGAETF--------ADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEHVNGKYSTPDL 405  white-tailed eagle
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