3U1X,3NMB,3H3L,3IMM


Conserved Protein Domain Family
DUF1080

?
pfam06439: DUF1080 
Click on image for an interactive view with Cn3D
Domain of Unknown Function (DUF1080)
This family has structural similarity to an endo-1,3-1,4-beta glucanase belonging to glycoside hydrolase family 16. However, the structure surrounding the active site differs from that of the endo-1,3-1,4-beta glucanase.
Statistics
?
PSSM-Id: 399445
View PSSM: pfam06439
Aligned: 185 rows
Threshold Bit Score: 61.2359
Threshold Setting Gi: 88782843
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
?
Program:
Drawing:
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
3U1X_A                              20 GYTLLFNGKDF-TGWKXFnggdvKGW-------QVEDGVIVgygnggdviadTTIKVSTDIVTV---K-NYHNFQIKWDW 87  Parabacteroides distasonis ATCC 8503...
WP_002650526                        27 GWVSLTDGKSF-DGWKIN-----ENEka----wSIKDGAFV-----------AKGSRSHLFYVGd--DkPFKNFILNLKV 83  Blastopirellula marina...
Q7UPZ9                              40 GFVSLFDGESL-DGWKKS-----TENpd---swQVEDGMLV-----------CKGERCHLFYVGe--LaPLKNFHFKADV 97  Pirellula sp....
EDL61356                            43 GWIELFNGKDL-TGWTVA-----EGGp-----fEVKDGVIE-----------VTGKRSHLFTDK-----EYKNFEFKADV 95  Gimesia maris DSM 8797...
WGS:AAXU:1101174000278_ALPR1_04738  23 EWVELFNGQNF-EGWKIS-----ENPds----fSIEDGMLK-----------VNGPRGHMFYEGevgDhDFNNFELEVTL 81  Algoriphagus machipongonensis...
Q024Y0                              27 PWIPLFNGNDL-EGWRPS-----EHKds----wKIRDGQIS-----------AEGPRSHLFYTG---R-EFKNFELEVEA 81  Candidatus Solibacter usitatus Ellin6076...
EDL59612                            64 KWISLFNGKNL-DGWKVPqf--------------ggEGEVH-------------VEKGNLILEMg--V-DLTGATLVDTK 112 Gimesia maris DSM 8797...
EAQ78410                            42 AWRSLFDGKTL-GDWKSVnf--------------ggEGEVS-------------VSDGAILMAQg--V-NLTGATYQKA- 89  Blastopirellula marina DSM 3645...
EAQ81012                            31 TAEKLFDGKSL-AGWKIAe---kGA--------FDQHGAVT-------------VKGGEILLVKg--D-SSTGIFRADQ- 81  Blastopirellula marina DSM 3645...
jgi:Tpet_0112                       74 PWKVLEESPHVeEG---------VQPdktigkiLRVEG-------------------NQGIFTP---G-EWTNFILECNL 121 Thermotoga petrophila RKU-1...
3U1X_A                              88 Ki-GA--QGNSGFLYHVQegPKYKAPFETGPEYQLID------DDNYpwvsetgkegLEDWQKTGCNYax---------- 148 Parabacteroides distasonis ATCC 8503...
WP_002650526                        84 Mt-KN--NSNGGVYIHTK--YQDENWPKQGFECQVNN------SYNS------------DPRKTASLYav---------- 130 Blastopirellula marina...
Q7UPZ9                              98 Kv-MP--GSNAGIYFHTK--YQESGWPKYGYECQVNV------SHKD-------------PKKTSSLYgven------id 147 Pirellula sp....
EDL61356                            96 Kt-TP--GSNSGIFFHTK--FQEEGWPTQGYESQVNV------SHKD-------------PVKTGSLYnr---------- 141 Gimesia maris DSM 8797...
WGS:AAXU:1101174000278_ALPR1_04738  82 Kt-LP--EANSGIFIHTK--YQERGWPNIGHEIQVNQ------SHGD-------------WRKTGSVYsf---------- 127 Algoriphagus machipongonensis...
Q024Y0                              82 ---LArpACNSGVYFHTA--YQESGFPIKGFEIQINNtatgegTYRE-------------RKKTGSLYgl---------- 133 Candidatus Solibacter usitatus Ellin6076...
EDL59612                           113 D--FP--LTNYEVELEAM--RVDGTDFFCGLTFPVKK------DPCS----------FILGGWGGSLCgissidgddasq 170 Gimesia maris DSM 8797...
EAQ78410                            90 ---PP--KTNYEIRFEAK--RLEGIDFFAGLTFPVED------SFCS----------WIVGGWGGAVVglssidgkdasq 146 Blastopirellula marina DSM 3645...
EAQ81012                            82 ---PP--RMNYEISLEAK--RTDGSDFFCGLTFPIND------EYCT----------MLIGGWGGGVTglsnvddlsave 138 Blastopirellula marina DSM 3645...
jgi:Tpet_0112                      122 RlnGI--LADGIVLFRLS------DDAKKGFYVNINL------FGAS------------LHKFAGSIDmk---------- 165 Thermotoga petrophila RKU-1...
3U1X_A                             149 yvPETKQVNPPGEWNSSXVLYKDGYVEhWLNGEKLFSFQEGSEDwkxrrysgkweafpdygisTTGKLCFQDHGSk--VY 226 Parabacteroides distasonis ATCC 8503...
WP_002650526                       131 -kDVAEAPAGDDEYFDYTIEVKDKTVKlSINGKLVNEYTEPADAeagkd---------ftrvfDKGTFALQAHDPgstVY 200 Blastopirellula marina...
Q7UPZ9                             148 aeTLAANGIRDNEWYTQEIIVRGKHIElKVNGKTLVDFTEPSDQeafsdr--------ferrlGEGTFALQAHDPqsiAY 219 Pirellula sp....
EDL61356                           142 -vKLFKTPAKDNEWWTQHIIVNGRHVIvKINDQTVIDYTEPEGAtgsp------------slgEKGSFALQAHDPksvVY 208 Gimesia maris DSM 8797...
WGS:AAXU:1101174000278_ALPR1_04738 128 -kDVRDTFVEDGEWYKETIIVQGDKVTvKVNGEVINEYDETKDRegdlg----------tkklDHGTIALQAHDPnsvVY 196 Algoriphagus machipongonensis...
Q024Y0                             134 -rNVYKQLVADDRWFKLHALVRGKNVQiRIDGMLVVDYTEPVPPvipdgm-------ekerflSSGTIALQCHNEgslAR 205 Candidatus Solibacter usitatus Ellin6076...
EDL59612                           171 nsTTTFQTFKKNQWYKIRLQVTDHKIQvWLDGKQIVDQNLKDRKisir-----------heveLSRPFGITSFCTt--AA 237 Gimesia maris DSM 8797...
EAQ78410                           147 neTTKYMGFDDNRWYRFRLKVTPEKIAgWIDDKLVIDQNIKDRKittr-----------nevtDSQPLGFSAWQSt--AA 213 Blastopirellula marina DSM 3645...
EAQ81012                           139 ngATGYQEFKNDQWYKIRLRVTPESVTaWIDGDSIFNVKIADAKfsiw-----------weqePMRPLGIATWNTs--AA 205 Blastopirellula marina DSM 3645...
jgi:Tpet_0112                      166 iaENTSVKASEDVWHYLKLVVNGQNIKvYLDGKKIIDVQDPDV--------------------FPGGIGFARAEDt--AF 223 Thermotoga petrophila RKU-1...
3U1X_A                             227 FKNVKIK 233 Parabacteroides distasonis ATCC 8503
WP_002650526                       201 YKDIRVK 207 Blastopirellula marina
Q7UPZ9                             220 FKNLRVK 226 Pirellula sp.
EDL61356                           209 YKNIRVK 215 Gimesia maris DSM 8797
WGS:AAXU:1101174000278_ALPR1_04738 197 YKSVKIK 203 Algoriphagus machipongonensis
Q024Y0                             206 FRSVRIR 212 Candidatus Solibacter usitatus Ellin6076
EDL59612                           238 LKNIRIR 244 Gimesia maris DSM 8797
EAQ78410                           214 IRKIEIR 220 Blastopirellula marina DSM 3645
EAQ81012                           206 LRNLELK 212 Blastopirellula marina DSM 3645
jgi:Tpet_0112                      224 YDNVRVE 230 Thermotoga petrophila RKU-1
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap