Conserved Protein Domain Family
TraD

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pfam06412: TraD 
Conjugal transfer protein TraD
This family contains bacterial TraD conjugal transfer proteins. Mutations in the TraD gene result in loss of transfer.
Statistics
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PSSM-Id: 399424
View PSSM: pfam06412
Aligned: 45 rows
Threshold Bit Score: 33.7016
Threshold Setting Gi: 500509310
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_012813411              79 DAKDKERTHNLIQSAGLLILAGlvdsktgNPTWDKGELLGALASMAKAEINDTKRQE-WKEKGDALL 144 Acetobacter past...
Q7N5V1                    38 SLTKSAETRLKIILGAEVAKAVgc----kVEDVDKEFVLGMLLQASNINVEAKAR---IKLRGKRFP 97  Photorhabdus lau...
Q6D350                    49 RDSKKENTRQKIILGAEVAKVLnc----dMSEVDKQLLFGLLLEVPSLHAHDIER---YKVNGQIYI 108 Pectobacterium a...
jgi:Xaut_5001              3 TEARRRDARQTFLLGGLVVRAG-------LGEADRAFLLGALIEARRIAPGSDEHER-LKAIGQDAF 61  Xanthobacter aut...
Q8KL69                     2 TAERKRDAREKFLLGGIVVRAG-------LSKADRAFLLGGLIELAKLAPGSIEHRR-LRDIGEEAF 60  Rhizobium etli C...
jgi:Oant_0648              2 sVKRKKDLRKKYLLGEIVVRAG-------LSTADRAFLLGGLLELARLLPDTAEFQR-LRNRGEMAF 60  Ochrobactrum ant...
WP_010974373               2 TSDRKKGAREKFLLGDIVVRAG-------LSDADRAFLLGGLLEMKRVVQGTPEHRR-LCDIGELAF 60  Agrobacterium tu...
goetting:OCA5_pHCG301050   7 SDDRKKDTREKIQLGGLIVKAG-------LRYEKRAVLLGMLIDAGGRIRASENERErLAAIGAEAF 66  Oligotropha carb...
Q1QEX0                     7 VEARKKDTREKIELGGLIAKAG-------LRYEKRALLLGLLIDAADRLRGNEAEHErLTAIGAKAF 66  Nitrobacter hamb...
P55420                     7 SDARKKDTREKIELGGLIVKAG-------LRYEKRVLLLGALVDLSRRLNSDESERArLIAIGAEAF 66  Sinorhizobium fr...
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