Conserved Protein Domain Family
Tfb5

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pfam06331: Tfb5 
Transcription factor TFIIH complex subunit Tfb5
This family is a component of the general transcription and DNA repair factor IIH. TFB5 has been shown to be required for efficient recruitment of TFIIH to a promoter.
Statistics
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PSSM-Id: 399380
Aligned: 83 rows
Threshold Bit Score: 57.095
Threshold Setting Gi: 402468634
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_003890117         1 MVKAHKGVLVTC-DPAAKQLILKLNDQPdhqisefglvtPFIIQEL--DDTHLMVTQECVNALKKQLEAELEKNTFTLD 76  Puccinia g...
Q8IL51               1 MVTAIKGVLVKC-DEPTMQIILMLNEEK-----------NFLIEKI--SDTVCLCKENVHDFLEKEVIKQLEYSERHET 65  Plasmodium...
Q4UCV7               1 MVSALTGTLLKC-DPPTMEIVKQINESK-----------HFIIEQI--DEGVALCKDSVTQFLKEEVTRRLEIAECYIP 65  Theileria ...
EDO05298             1 MVTSMRGILVKC-DPPTMEIVKQINETR-----------HFIIEQL--DESVALCQESVFDFLSEEVTRRLEFAERLTP 65  Babesia bovis
XP_008073480         1 MVRATKGTYIKT-EMSIKEIIMFINETD-----------NVVIEEI--KDNAVFIQPNKIDMLKLKIENCLNSTYKHIE 65  Vavraia cu...
WGS:AFBI:EDEG_01956  1 MVKLSRGSLLKT-EPNIKELILRICE-------------HAVIEDI--NDSTLFVKTEYIEDIKVQVYKIIANATKQLE 63  Edhazardia...
EFN57049             1 MVQATHGVLITG-DVVLIEFIRSLNEEQpp-------keRFIIKDL--GEKNLFIKDKKVEFVQKKVAEWQQSLRFEPK 69  Chlorella ...
JCVI:AT1G62886.1     1 MVNSIKGVFISC-DVPMAQFIAHLNNSLpa-------sqKFIIQVLklDTTSMFVKPYAEEMIRDAVIKFRDENSYAKA 71  thale cress
EGD78647             4 EVHVERGIVLRC-DMSIKTFVQALEARKiin-----ngnPFIIEDL--GSFGLFVNRDCVEEIEGRVASMLDSNHFDDD 74  Salpingoec...
EAY23631             3 fGSPKNGEFIECtDPAIREYLIFLNSKEpa-------ehKFIITDI--DDRYLFIKAGVSDKLKEKINLLVTSNTFSEE 72  Trichomona...
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