2IMH


Conserved Protein Domain Family
DUF1028

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pfam06267: DUF1028 
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Family of unknown function (DUF1028)
Family of bacterial and archaeal proteins with unknown function. Some members are associated with a C-terminal peptidoglycan binding domain. So perhaps this could be an enzyme involved in peptidoglycan metabolism.
Statistics
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PSSM-Id: 399342
Aligned: 153 rows
Threshold Bit Score: 99.4423
Threshold Setting Gi: 644426173
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2IMH_A                    4 TFSILAHDPETGAIGGAAATGSLCVGGWVLR--------GDLNaGXSASQGAaPSTFWGEEVLQHLRDGSHPEDAVNHVT 75   Rue...
WP_005517551              2 TYSVVARCDRTGQLGVATATSDVAVGARVPW--------LRTGvGAVVTQHR-TDPRLGPRLLDLMAGGATAAEAVDGVR 72   Rho...
jgi:Gobs_4339             2 TFSVIARDPATGELGIAVSSCILAVGRAVPS--------ARPGvGVVAVQAR-SRRGLGQSLLAGLADGGDPADLVRAAA 72   Geo...
WP_012866658              2 TFTLIAVDREHGLLGAATASRSLAVGNAVIT--------VDPAvGVVASQAW-TNRTLRHRMLDAIADGDDAQAAVDRVP 72   San...
WP_013583246              2 TFTVLARDTRHGLIGAATASRSLAVGASVIA--------VDPAvGVAASQAW-TNRALRGRLLAAMREGRTAAEAVASVP 72   Mic...
jgi:Psta_2328            59 TFSIVACDPEHGEVGAAVASMYPSVGRVVPY--------VKAGiGAFCTQHY-HVPKWGEPALAMLKEGKRPERVLAELL 129  Pir...
mpitm:STAUR_7840         36 TRSIVACDVAAQACGVAVIS-FPVTSSMVPY--------GKPGl-ALANQML-PSVELAHDIIARIDSGQHPQQALTAAL 104  Sti...
WP_014394167             37 TRAIVACDAVEKSCGVASISFPAGISGLVPY--------GRPDv-AIATMFY-PSVDDAEAVLARVDAGNTAQQAVDYVF 106  Cor...
WP_013185895             53 TFSIVAYDPSTGEIGSAGTS---CVAQTIDFlgdlitnnSGAIiGGINTQAA-YIAQNQTIARNRMLAGDTPQEIVAYMA 128  Cro...
PRJNA213647:NX02_00875   23 TYSILACD-ADGTCGAAVATNNLAVGATVIY--------ARAKvGAVASQFE-TNPSHGPKGLSLLAGGASAEAALDELL 92   Sph...
2IMH_A                   76 ---SQDS-----GR-AYRQLAAXDLLG----NaAAFTGSEN--QDiKGSVT-FASGIASGNXLGDNSVLGAXTEAFvas- 138  Rue...
WP_005517551             73 ---HSSV-----HA-DWRQLAAIGTHG----PgIAWTGAYVdpVGvSVVTA-ADH-VVAGNILVGDIVGRAASAAFdssa 137  Rho...
jgi:Gobs_4339            73 ---HAAE-----DV--DRQIAVLDATG----RvAADTGRGS--FP-VSGHLlGEQLSVQGNMLASPEVLPAMVQAFsaa- 134  Geo...
WP_012866658             73 ---SWDD-----EA-GLRQVAALDLRG----GtAAWTGDRT--SA-WAGHSvARDHAVLGNLLVGPAVLDAMSSAYada- 135  San...
WP_013583246             73 ---SWDE-----GY-ALRQVAALAWTS----PgAARSGEAI--TA-WAGHStTTDAVFAGNLLTGPEVLEAMSAAWvrs- 135  Mic...
jgi:Psta_2328           130 ---ESDP-----QP-GARQLAIVNMKG----EvAVHNPDTApkESsYWGAQtGKFYSCQGNTLTGREVIAGMAAAYeat- 195  Pir...
mpitm:STAUR_7840        105 appGTDP--------QNRQIGVAIIRNna-vQvGQYTGQAS--WTeRCSLL-GSTYAIQAAGQTSAAVCQAMATGFera- 171  Sti...
WP_014394167            107 ---SVDP-----YA-DYRQLAVVKLNPngtiTvGQQTGAQN--APqRCAVK-GATFVVQANNQTTATVCDAMASAFqrt- 173  Cor...
WP_013185895            129 ---ANDFq----GNsSTRQYGVVGFDDfgnlTtAGLTGNG---TGsFADHItGVNYAIQGNILWDSDVLTDMETAFlnt- 197  Cro...
PRJNA213647:NX02_00875   93 ---RTDDgfegqDK-TYRQIGIIGASG----DgGAFTGAQAaaSP-WAGALtGPGYSIQGNGLAGAPVLAAMRDAYlga- 162  Sph...
2IMH_A                  139 dlTF-----------ERRLLAALIAAEGAGSDFR--GL----LSAAXLVLHpd-------rPPVTLRIDYhPDNPIGAL 193  Rueg...
WP_005517551            138 glEL-----------GERLVRALEAGLAAGGEPE--PL----RSACLRVHGse------qfPLVDLRVDE-HPDPLREL 192  Rhod...
jgi:Gobs_4339           135 rgDL-----------PDRLLAALTAGQDAGGDVR--GR----QSAALLVVSgtpasdeddgVGMDLRVDD-SGDPVAQL 195  Geod...
WP_012866658            136 atTLpeadpstplgfAARLLAALEAGDLAGGDLR--GR----QSAAVVAARvtgerehpplLAVDLRADD-HERPVAEL 207  Sang...
WP_013583246            136 sgDL-----------AGRLIEVLRAGDLAGGDAR--GR----QSAAVLVAsp-------adTLLDLRVDD-HDEPLAEL 189  Micr...
jgi:Psta_2328           196 egSL-----------ADRLMAALLAGDCAGGDHR--GR----LAAGIRVDKvreqdeaefkLWLDLQVDR-SDDAVIEL 256  Pire...
mpitm:STAUR_7840        172 rgSL-----------ALRLLESLKAGAAVGQDAR--GE----RSGTVRVWApss----qtdGFTYYIADAsVAGKRDAL 229  Stig...
WP_014394167            174 tgSL-----------PQRLLTSLRAGARVGHDNN--GE----RSGVIRVWTsen----estFYTKVLADAvVHSSRTAL 231  Cora...
WP_013185895            198 ngTL-----------ADKLMAALKGAKRVGGDSRcdTRgnsgRSSFIKVLRpgd-----ssPYIDI-----TLGPVVDG 255  Croc...
PRJNA213647:NX02_00875  163 rgTL-----------GERLMAALEAGDAAGGQST--GR----LSAALLVRTpeg-----gfQDIDLRVDA-DDRPVAAL 218  Sphi...
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