Conserved Protein Domain Family
Phage_min_cap2

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pfam06152: Phage_min_cap2 
Phage minor capsid protein 2
Family of related phage minor capsid proteins.
Statistics
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PSSM-Id: 428793
Aligned: 20 rows
Threshold Bit Score: 289.253
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
CDF07386       4 EEQLEIISETIAPLFQYLEHEVIVDIARRIAKTLT---YSRTAELQAMSMADLGYSparirkeamkilnadpeyrkavak 80 
CDD27561       3 ENKIQSAIKSIISIYSKMEVELIEKIAEHFKINEE---FINSDYWYFEKLKELGGL------------------------ 55 
WP_014440373   5 PDKLTEIIRATVDLYRAGEHGLLRLVTRYLAT------GIDTPGWAIERLAALGQL------------------------ 54  Actinoplanes mi...
WP_010191078   5 paRTEGLNDDVVALYRRAEMYLIEVIRRALIRTGE------SPTWAEAQLLAIRQE------------------------ 54  Corynebacterium...
CCZ35652       4 KSEKQEFSDPGVRIYSDLETLIMQNIIRHVRNYDQ---LIDSDTWLMQKLAEIGKL------------------------ 56 
Q8Y4Y1         5 PRQLDLFVQPVVDVYTGLENELFTLIVRRLKTKKNi-sADNVLAWQIEKLNQVHAL------------------------ 59  Listeria monocy...
WP_015077115   5 PYQLDLWSSNMSHIYQSLEGEILKIIIKQLNTN-----PDNIQDWQHQKLNDLKLI------------------------ 55  Carnobacterium ...
Q9A0P2        10 DEQLLLEASQLSDMYHQLTLDLFDQVIERIKARGSaslADNPYLWQANKLHDVGLL------------------------ 65  Streptococcus p...
WP_014117672   4 PDQIAALRDRAAQIADPINDYLIADIARRISEAGQ---LTSTAAYGVWRAQQLGVS------------------------ 56  Oscillibacter v...
CDC47019       3 edykKQLSGQIEKHYRNLERMILEDIVRRIKKAGK---ITSTADWQINRLRIIGYS------------------------ 55 
CDF07386      81 ntleyKREIRNTINDITREAYKANDDIVAGAGNMAWISDL---AVWKSVG-----KE---LKDHSFLQQLVDAFAAQTAG 149
CDD27561      56 -----NNETLKLLEEYTGKTKKELAKAMKDIGISSIPVDQlniATQKNALln--pET---IINSANIQNIIQYSYDEIEK 125
WP_014440373  55 -----RRAGQDILDSISDELAETVLQAVANAYAAGGASVLeeiPTELSAGaaagaAAtavVPRSAAMEALAQALVQDIGA 129 Actinoplanes mi...
WP_010191078  55 -----RGNIEGMADALHKRLGTTWRSTIDAAYLRGQIEAEkelAALPEHLrptpaAPv--FESSAAVYALVSEAITTMEP 127 Corynebacterium...
CCZ35652      57 -----NRENMKIIAKTVDLSRTAVEHMLEEVADLVMERVEpdlYETERKGildqtIP---AKKSENVKAAVQAIQKQALD 128
Q8Y4Y1        60 -----DQQMLNKISKASGVSAKKLFSIVKDAGYSDLKQVDnyfSKLAEAGav-lpLV---GDGQTIVDKVMRSYFKLAES 130 Listeria monocy...
WP_015077115  56 -----NKDTAKVVSDATGLSQKQIENIFGEVGPKIIKDVDgavPYDD-------------LPLPTDLDNIMRAYYEQAWG 117 Carnobacterium ...
Q9A0P2        66 -----NADNIKLIAKYSGIAEAQLRYIIKNEGFKIYKNTSeqlEEALGRE----------SGVNSTIQDDLSNYARQAID 130 Streptococcus p...
WP_014117672  57 -----QREMKKRLRKLLKVSHRDLRKLLTQSAEVGYNFDIknlPQVQA-------VP---FEQNQTMQQIVSAAVKLAQD 121 Oscillibacter v...
CDC47019      56 -----SEDIEKMIKDTLKLSYPEVFELYDKVIDWEYVRNK---DIYEQVNak--yIP---YEENEELQQLTEGFIQQSNN 122
CDF07386     150 ELKNMTQSTGfktm-----sgyEGIENAYRRELDKAVIKI--------------------CSGTFSQDKVIRDVVHDLAQ 204
CDD27561     126 SFLNLNKTIQ------------EQVRKTYTDIITETYIKT--------------------NAGVCSYQEAILDSLDKLGD 173
WP_014440373 130 RHSNVL----------------RHITDVYRRVVAEGTAAS--------------------IAGGLTRREASQLTYARLVE 173 Actinoplanes mi...
WP_010191078 128 VHRNLV----------------RRVDDIWRRIGVEATGYS--------------------VTGVMTTQQAAQRAFTRMAR 171 Corynebacterium...
CCZ35652     129 SL-NVCNTTMl-----------YMARDAYTRLVQQTAEKAeeiankqefldilgkhataqIIGAESRQQAIQSTIKEFNE 196
Q8Y4Y1       131 NY-NRVNQTMl-----------SQARQIYSDIIHETTQSV--------------------LAGLKTHRQALAETVTKFAE 178 Listeria monocy...
WP_015077115 118 DVDNYVNQTListn----ngyrTAITAMYTDIINKTTAGF--------------------NAGLFTFEEALEKTVQKWAQ 173 Carnobacterium ...
Q9A0P2       131 DVHNLTNTTLp-----------FSVIGAYQGIIQDAVAGV--------------------VTGLKTPDQAINQTVIKWFK 179 Streptococcus p...
WP_014117672 122 DFTNLTQTMGlidp----ygkaLPLQDAYRSCTDYAFKQV--------------------FTGAADYNTAVRRACKNLAD 177 Oscillibacter v...
CDC47019     123 ELRNITQSMGfyvdygngklvmTPLADIYQNYLDQAITGV--------------------VYGSFDYNTMIRKVVTQLTN 182
CDF07386     205 SGL-R--SIDYASGYSMQLDT--ASRLAIRTGCHQLAGKIQDKNIEQTGENLVYVSKHRGARnkg--ighANHEQWQGRV 277
CDD27561     174 KGI-SilTYQDKNGNIKNYDVvgTVRRDLLVATRGLAGKVNEEVIKESGNHIVRVTNHFGARtgdggedyTNHAWWQEKQ 252
WP_014440373 174 QGV-V--SFVDARGRRWRMSS--YVEMAIRTVTQRAAVQGQVDKQRRLGLPFVVVSNEAQEC--------ERCRPYEGRV 240 Actinoplanes mi...
WP_010191078 172 EGL-P--FYVDKAGRKWGLDT--YAEMAVRTMTNKALRAGHTNTMIEHGIDLVVVSSHKNPA--------PQCAPYERKV 238 Corynebacterium...
CCZ35652     197 KGI-P--AFVDKRGREWTPEA--YVAMTLRTTAGNTATEAMFARMKDRGLSLIQVSEHPGAR--------PKCAKDQGKI 263
Q8Y4Y1       179 NGV-P--ALVDKANKRWTPEA--YVRTVTRTTVNSVYNSVEDERMNEYDVDLVRISQHVGAR--------PTCSLVQGKV 245 Listeria monocy...
WP_015077115 174 KGInS--SFIDKGGHTWSLER--YVRTVLKSTLGNTYNQLRKDRMAEYDVHTVIVTSHMGAR--------AACSKIQGNV 241 Carnobacterium ...
Q9A0P2       180 KGF-Y--GFTDKAGRKWRADS--YARTVINTTTWRVFNEAKEAPAREFGIDTFYYSKKATAR--------EMCAPLQHQI 246 Streptococcus p...
WP_014117672 178 KGV-Q--WIDYESGVHTSLEA--AVRRNIMGGLGLMQEQITQANHDELGADGWEISAHANSA--------PDHEPIQGKQ 244 Oscillibacter v...
CDC47019     183 SGL-R--HVDYASGWHNRVDV--AARRAVMTGVSQLTGKISDINAEKLGTEHFEVAWHSGAR--------PSHAVWQGKV 249
CDF07386     278 Y---YIKEGQDYREEADrigqdsiTDLWRATGYSAdgaheddPEGLYGYNCRHnHYAWFEGASSFP----------KNhd 344
CDD27561     253 FfcwNYDGNATEEEKKL-------PDFMEHCNYGD-------VQGIVGINCKH-LFTVWYGSTKKEdlgftydenkEE-- 315
WP_014440373 241 L----RIGSGPTGTIEVahq-ttgEPVTIDVRATLdd---arSWGFQHPNCRHsVRSYLPGITRLPrqpta--------- 303 Actinoplanes mi...
WP_010191078 239 L---SLTGKFALGTHRIgdnivnvKATMRDAE----------SSGLHHPNCRHtHSAYIPGYTRISdapyd--------- 296 Corynebacterium...
CCZ35652     264 F---DRNNNRGITTDLHgkq--ipFYPLKESSYGE-------PDGLFGINCGHhGVPFIPGVSRQRyq--------pTkd 323
Q8Y4Y1       246 I---CLLSVEETKTKYGnk---ymSIYSPELRYGY-------GDGVFGCNCRHhRFPFVEGINVAPed-------sELid 305 Listeria monocy...
WP_015077115 242 V---DLR--ESVPAKAEyr---siYDSYWNAEYGT-------AGGHRGVNCTHnHIPFIPGVNTNNqtkyna-------- 298 Carnobacterium ...
Q9A0P2       247 V----TTGEAREEGGIK-------ILALSDYGHGE-------PDGCLGINCKHtKTPFVVGVNSKPelp----ehlKNit 304 Streptococcus p...
WP_014117672 245 Y---------------------------TDAAYTAlnd--slVRRIGTLNCGHaAFPIILGV-SSPqytd---eelKKfr 291 Oscillibacter v...
CDC47019     250 W---SKK------------------ELVTVCGLGT-------GPGLLGWNCYHeYYPFVKGI-SERnwtd---ewlAEqn 297
CDF07386     345 ekdpapvtingktydyYAMTQKMRSMERNIRALKREKEALTTL---GADTTEINARIKSKTAEYKEFCK 410
CDD27561     316 ----------------YEKTQKQRYLENGTRKWKRKQVIAKKVq-dEDGYNKASLKTKEWQDRLHKFTQ 367
WP_014440373 304 ------------dpdgDAARQRQRAIERAIRRWKERELAALT----PAAAAQARARVVLWQGQMRQHLA 356 Actinoplanes missouriensis
WP_010191078 297 -----------gddtgYKATQKQRYYERQIRASKRMEQAAID----ETDVRAARQRTRAYQAKLRDHVA 350 Corynebacterium aurimucosum
CCZ35652     324 mee---------ndklYKKMQTQRSMEREIRKQKRLCSLYDKAg-eEEAFEKAAVKLKEKETQLTQYLE 382
Q8Y4Y1       306 eee---------nkrvYMLSQQQRLMERDIRASKRKLSAAEELg-dELAVKKAKQAVRTKQSKLRAFVN 364 Listeria monocytogenes
WP_015077115 299 ----------senekvAKLTKRQRELERRIVKLKKNKMVSESMd-nTDGAKIWQRDITATQRAIRELVD 356 Carnobacterium maltaromaticum
Q9A0P2       305 paq---------akanANAQAKQRAIERSIRKSKELLHVAKQLg-dKELIRQYQSDVRSKQDALNYLIN 363 Streptococcus pyogenes ser...
WP_014117672 292 ednaagvtyqgrhytgYEATQMQRKVERAMRTQKRRILADETTg-dKDKLTTDQIRLRRLDEEYKRFSK 359 Oscillibacter valericigenes
CDC47019     298 rkentpkhfngkeytlYEAKQQQRKMETAMRAQREKVVLLKQGgadTDDVMIARIKYQGQLGEYARFCK 366
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