Conserved Protein Domain Family
Phage_min_cap2

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pfam06152: Phage_min_cap2 
Phage minor capsid protein 2
Family of related phage minor capsid proteins.
Statistics
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PSSM-Id: 399274
Aligned: 22 rows
Threshold Bit Score: 281.928
Threshold Setting Gi: 504253271
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
CDF07386               4 EEQLEIISETIAPLFQYLEHEVIVDIARRIAKTLT----YSRTAELQAMSMADLGYSparirkeamkilnadpeyrkava 79  Firmicu...
CDD27561               3 ENKIQSAIKSIISIYSKMEVELIEKIAEHFKINEE----FINSDYWYFEKLKELGGL----------------------- 55  Clostri...
CCZ35652               4 KSEKQEFSDPGVRIYSDLETLIMQNIIRHVRNYDQ----LIDSDTWLMQKLAEIGKL----------------------- 56  Firmicu...
WP_014440373           5 PDKLTEIIRATVDLYRAGEHGLLRLVTRYLAT-------GIDTPGWAIERLAALGQL----------------------- 54  Actinop...
Q8Y4Y1                 5 PRQLDLFVQPVVDVYTGLENELFTLIVRRLKTKKNi--sADNVLAWQIEKLNQVHAL----------------------- 59  Listeri...
WP_015077115           5 PYQLDLWSSNMSHIYQSLEGEILKIIIKQLNTN------PDNIQDWQHQKLNDLKLI----------------------- 55  Carnoba...
microsynth:EHR_02630   4 PHQLDLWSSNMAHLYQSLEGELIRIIIKRLNNG------HDDILEWQREKLQELHLF----------------------- 54  Enteroc...
BAO07823               5 PNQLDIEASYIQDAYMAMEDEIMRMLVKHLKMPTRtplnEDNAFHWKIEKMHQLNLLn---------------------- 62  Enteroc...
Q9A0P2                10 DEQLLLEASQLSDMYHQLTLDLFDQVIERIKARGSas-lADNPYLWQANKLHDVGLL----------------------- 65  Strepto...
SKLIDPC::KE3_1408      9 DQQFSLQMQGVSDIYAQMQQELFDNMIKRLIVRGSad-lQENPYIWQMQKLNDMHML----------------------- 64  Strepto...
CDF07386              80 kntleyKREIRNTINDITREAYKANDDIVAGAGNMAWISDL---AVWKSVG-----KE---LKDHSFLQQLVDAFAAQTA 148 Firmicu...
CDD27561              56 ------NNETLKLLEEYTGKTKKELAKAMKDIGISSIPVDQlniATQKNALln--pET---IINSANIQNIIQYSYDEIE 124 Clostri...
CCZ35652              57 ------NRENMKIIAKTVDLSRTAVEHMLEEVADLVMERVEpdlYETERKGildqtIP---AKKSENVKAAVQAIQKQAL 127 Firmicu...
WP_014440373          55 ------RRAGQDILDSISDELAETVLQAVANAYAAGGASVLeeiPTELSAGaaagaAAtavVPRSAAMEALAQALVQDIG 128 Actinop...
Q8Y4Y1                60 ------DQQMLNKISKASGVSAKKLFSIVKDAGYSDLKQVDnyfSKLAEAGav-lpLV---GDGQTIVDKVMRSYFKLAE 129 Listeri...
WP_015077115          56 ------NKDTAKVVSDATGLSQKQIENIFGEVGPKIIKDVDgavPYDD-------------LPLPTDLDNIMRAYYEQAW 116 Carnoba...
microsynth:EHR_02630  55 ------NKETVKVISQVTGIAESEIERMFENTGDKIIRDTDrelPYDT-------------KPIPTNLDNIMKAYHDQVW 115 Enteroc...
BAO07823              63 ------QQSLQRLVNETSQYSYDQLRKIIVDMGFEVISDLDknlSQQTGKE----------PPSRTEIDNVMESYLNQQW 126 Enteroc...
Q9A0P2                66 ------NADNIKLIAKYSGIAEAQLRYIIKNEGFKIYKNTSeqlEEALGRE----------SGVNSTIQDDLSNYARQAI 129 Strepto...
SKLIDPC::KE3_1408     65 ------NEENLKIITERTGIAEDLLRDVIANEGLKVYKDTKqqlAEDLGRR-----DG---EYIANGVTDSLEAYTSQAI 130 Strepto...
CDF07386             149 GELKNMTQSTGfktm-sgyEGIENAYRRELDKAVIKI--------------------CSGTFSQDKVIRDVVHDLAQSGL 207 Firmicu...
CDD27561             125 KSFLNLNKTIQ--------EQVRKTYTDIITETYIKT--------------------NAGVCSYQEAILDSLDKLGDKGI 176 Clostri...
CCZ35652             128 DSL-NVCNTTMl-------YMARDAYTRLVQQTAEKAeeiankqefldilgkhataqIIGAESRQQAIQSTIKEFNEKGI 199 Firmicu...
WP_014440373         129 ARHSNVL------------RHITDVYRRVVAEGTAAS--------------------IAGGLTRREASQLTYARLVEQGV 176 Actinop...
Q8Y4Y1               130 SNY-NRVNQTMl-------SQARQIYSDIIHETTQSV--------------------LAGLKTHRQALAETVTKFAENGV 181 Listeri...
WP_015077115         117 GDVDNYVNQTListnngyrTAITAMYTDIINKTTAGF--------------------NAGLFTFEEALEKTVQKWAQKGI 176 Carnoba...
microsynth:EHR_02630 116 SDINNYVNQTLlstnfgygTATTQMYTEIVNKTTAAF--------------------NSGIFTFEEALARTIQQWAQKGI 175 Enteroc...
BAO07823             127 RDLDNHINQTLidtn-ypnNPLAKMYQQVLNDTVAKI--------------------IGGTKTPQQALRESIYAMVEKGV 185 Enteroc...
Q9A0P2               130 DDVHNLTNTTLp-------FSVIGAYQGIIQDAVAGV--------------------VTGLKTPDQAINQTVIKWFKKGF 182 Strepto...
SKLIDPC::KE3_1408    131 SDL-NLINTTLp-------RSIQKTYKSIVEKSVAEV--------------------VISSKSADKAIRDTIMKWQKKNF 182 Strepto...
CDF07386             208 -R--SIDYASGYSMQLDT--ASRLAIRTGCHQLAGKIQDKNIEQTGENLVYVSKHRGARnkg--ighANHEQWQGRVY-- 278 Firmicu...
CDD27561             177 -SilTYQDKNGNIKNYDVvgTVRRDLLVATRGLAGKVNEEVIKESGNHIVRVTNHFGARtgdggedyTNHAWWQEKQFfc 255 Clostri...
CCZ35652             200 -P--AFVDKRGREWTPEA--YVAMTLRTTAGNTATEAMFARMKDRGLSLIQVSEHPGAR--------PKCAKDQGKIF-- 264 Firmicu...
WP_014440373         177 -V--SFVDARGRRWRMSS--YVEMAIRTVTQRAAVQGQVDKQRRLGLPFVVVSNEAQEC--------ERCRPYEGRVL-- 241 Actinop...
Q8Y4Y1               182 -P--ALVDKANKRWTPEA--YVRTVTRTTVNSVYNSVEDERMNEYDVDLVRISQHVGAR--------PTCSLVQGKVI-- 246 Listeri...
WP_015077115         177 nS--SFIDKGGHTWSLER--YVRTVLKSTLGNTYNQLRKDRMAEYDVHTVIVTSHMGAR--------AACSKIQGNVV-- 242 Carnoba...
microsynth:EHR_02630 176 kS--TFIDKGGHTWSLER--YVRTVLKSTLSNTYDTLRKERMSEYGVYTVVVTSHMGAR--------QACSKIQGNVV-- 241 Enteroc...
BAO07823             186 mT--TFVDKAGREWSLER--YVRMVLKTTTHHVYQDLRLKRGLEHGIVTAIMSSHMAAR--------PHCAHIQGGWV-- 251 Enteroc...
Q9A0P2               183 -Y--GFTDKAGRKWRADS--YARTVINTTTWRVFNEAKEAPAREFGIDTFYYSKKATAR--------EMCAPLQHQIV-- 247 Strepto...
SKLIDPC::KE3_1408    183 -T--GFVDKGGREWRADA--YARAIIKTTTFRVYNEMRTAPAKEMGIDTYYYSKKATAR--------EMCAPLQGRIV-- 247 Strepto...
CDF07386             279 -YIKEGQDYREEADrigqdsiTDLWRATGYSAdgaheddPEGLYGYNCRHn--HYAWFEGASSFP----------KNhde 345 Firmicu...
CDD27561             256 wNYDGNATEEEKKL-------PDFMEHCNYGD-------VQGIVGINCKH---LFTVWYGSTKKEdlgftydenkEE--- 315 Clostri...
CCZ35652             265 -DRNNNRGITTDLHgkq--ipFYPLKESSYGE-------PDGLFGINCGHh--GVPFIPGVSRQRyq--------pTkdm 324 Firmicu...
WP_014440373         242 --RIGSGPTGTIEVahq-ttgEPVTIDVRATLdd---arSWGFQHPNCRHs--VRSYLPGITRLPrqpta---------- 303 Actinop...
Q8Y4Y1               247 -CLLSVEETKTKYGnk---ymSIYSPELRYGY-------GDGVFGCNCRHh--RFPFVEGINVAPed-------sELide 306 Listeri...
WP_015077115         243 -DLR--ESVPAKAEyr---siYDSYWNAEYGT-------AGGHRGVNCTHn--HIPFIPGVNTNNqtkyna--------- 298 Carnoba...
microsynth:EHR_02630 242 -DLRQMSELPSNWKyr---siYDPYWNAEYGT-------PGGHRGVNCQHl--HIPFVPGVNINNqpkyda--------- 299 Enteroc...
BAO07823             252 -LLVRKEDAPEELRh------IPSIYDHGYGE-------PDGTQGINCRHrlyIQIYDPDLdi----------hmKQydp 307 Enteroc...
Q9A0P2               248 --TTGEAREEGGIK-------ILALSDYGHGE-------PDGCLGINCKHt--KTPFVVGVNSKPelp----ehlKNitp 305 Strepto...
SKLIDPC::KE3_1408    248 -TMEGMTHTEQGVK-------VLALSDYGYGY-------AGGCLGVHCGHy--LTPFIVGVNELPedp----dhlKDltp 306 Strepto...
CDF07386             346 kdpapvtingktydyYAMTQKMRSMERNIRALKREKEALTTL--GADTTEINARIKSKTAEYKEFCK 410 Firmicutes bacterium...
CDD27561             316 ---------------YEKTQKQRYLENGTRKWKRKQVIAKKVqdEDGYNKASLKTKEWQDRLHKFTQ 367 Clostridium sp. CAG:452
CCZ35652             325 ee---------ndklYKKMQTQRSMEREIRKQKRLCSLYDKAgeEEAFEKAAVKLKEKETQLTQYLE 382 Firmicutes bacterium...
WP_014440373         304 -----------dpdgDAARQRQRAIERAIRRWKERELAALT---PAAAAQARARVVLWQGQMRQHLA 356 Actinoplanes missour...
Q8Y4Y1               307 ee---------nkrvYMLSQQQRLMERDIRASKRKLSAAEELgdELAVKKAKQAVRTKQSKLRAFVN 364 Listeria monocytogenes
WP_015077115         299 ---------senekvAKLTKRQRELERRIVKLKKNKMVSESMdnTDGAKIWQRDITATQRAIRELVD 356 Carnobacterium malta...
microsynth:EHR_02630 300 ---------kenekvALLTSRQRQLERQVVKYKKNRMVSEALgqDENAQDWSRKIRAIQSRLRTLVD 357 Enterococcus hirae A...
BAO07823             308 kq---------aidnADLVAKQRRMEVAIRRAKRQLNGATTMdnKEDVLHFKQLVRRRQAALRTFIN 365 Enterococcus mundtii...
Q9A0P2               306 aq---------akanANAQAKQRAIERSIRKSKELLHVAKQLgdKELIRQYQSDVRSKQDALNYLIN 363 Streptococcus pyogen...
SKLIDPC::KE3_1408    307 eq---------aeenARIQAKQRAIERAIRNQKERLHIASQLgdDELITSERLKLRNLQGKMRAYVD 364 Streptococcus luteti...
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