Conserved Protein Domain Family
RRP36

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pfam06102: RRP36 
rRNA biogenesis protein RRP36
RRP36 is involved in the early processing steps of the pre-rRNA.
Statistics
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PSSM-Id: 399240
Aligned: 166 rows
Threshold Bit Score: 63.7046
Threshold Setting Gi: 74861911
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_001462941              14 KRPRRTTSSRGAKSST-NTASS-------VtsaV------AQR------------RiDPRFDPMFGRADKRMFEQ---NY 64  Lei...
Q4DLV7                     4 dtsdgpPPERSARVRP-KHRSA-------LpavR------RQR------------AvDPRFSDLYGTVDQKQFEV---HY 54  Try...
EFC44684                 135 RKNKNAPKEVSSKLKP-KSIPDiakrlgyV----------KKK------------SrDPRFDPTASDTDPSSFKQfsgHY 191 Nae...
CAQ38048                  15 IKKGQRPMVVSNRKPF-NIFEK------------------KKTakp-------ivR-DPRFSNLSGTLNPSFFKK---AY 64  Pla...
XP_001612070              52 KRSSKAPVTLSNDVAY-NPYQK-------LkfdTkggknrMKA------------R-DPRFSDFSGTLNDDLFRK---SY 107 Bab...
Q4U8J3                    39 KRKSNAPVELPNNFSF-NPYGS------------------NKLskksgkgkkmvtR-DPRFSELSGKLNVDMFRR---SY 95  The...
Q4N193                    39 KKRSNTPVELPNNVSF-NPYRS------------------NKFskkpgkgnkmlvR-DPRFSEHSGKLNLDMFRR---SY 95  The...
XP_001309958              13 KKSRNAPQELSTSKPCgRKLLD-------TeesH------KIT--------------DPRFREECGEIDKVGFVK---NY 62  Tri...
WGS:AAFB:cds.EHI_007980A   1 mgKNDAPMEVSAKKKV-SRTIE-------IfkpK------KIE------------RrDPRFTEEGGKVSMLGFCK---KY 51  Ent...
XP_008103133             217 pskdRPLEISAKKPVS-FLRQV-------V---Pvt---kKVPr-----------D-PRFDDLSGEYKPEVFEKT---YS 267 gre...
XP_001462941              65 G-FLREAEEKeeaerrfrikclrcvirrcELEEAGEDLD-----EYDlsdyeqevfgedhqrelremkltpPQRLyaelE 138 Lei...
Q4DLV7                    55 K-FLREQQEEeethrrnrirrlkciarrgELEASGADLE-----EYDlseterevfgedhldelsamkllpLQEVqrelQ 128 Try...
EFC44684                 192 KhVFDQLKD--------------------EIDENRERLR-----DKSl----------------------tYEDR----N 220 Nae...
CAQ38048                  65 K-FLYEKREE-------------------EKGIIEQKLK-----GKKl----------------------tQEER----Q 93  Pla...
XP_001612070             108 A-FLGDMLQD-------------------EVKEIKSALR-----VSQragvnsikta----nalrniahmnISSL----S 154 Bab...
Q4U8J3                    96 S-FLEDMRKE-------------------EVKDIMQAIK-----INKkfgtdslkgi----esmkkishlnISNI----E 142 The...
Q4N193                    96 S-FLEEMRKE-------------------EVKEITRAIK-----INKkfgteslkgi----esmkkishlnISNL----D 142 The...
XP_001309958              63 A-FLQKNREQ-------------------EISQMQKELEddptlADD--------------------------------P 90  Tri...
WGS:AAFB:cds.EHI_007980A  52 K-FLEEKQKE-------------------EANELSKQIKn----CKD------------------------AQER----E 79  Ent...
XP_008103133             268 F-LNDIRKKE-------------------KEIVQKQLKKs----KNV------------------------DQKT----K 295 gre...
XP_001462941             139 QLQRASQLYVSKTRDASVKDRRSSVKQELLRKEVVA--VKA-GRKarPYFPKRAEVKRAM--TADTFSRLNd-------- 205 Lei...
Q4DLV7                   129 QLQRESQLHVSRTKGRHVQSRRDTLRKEIIKREALA--VKE-GKKqrPFIPKRAHLKREI--LADTFERLEr-------- 195 Try...
EFC44684                 221 EIQREISRLQTRNKKFETQKAVAEVKDSFYKREKKL--ISEkGKQ--AYFLKDSDVKKIL--KERKVEGIK--------- 285 Nae...
CAQ38048                  94 DLKNKLNTYKDTERVLQRKEEERKLKQKLVTEEKKNi-LHK-NKQ--PFYYSQRKIKKMVneQMANKGSI---------- 159 Pla...
XP_001612070             155 DAKRALDRYTTQQKQLKSDQALRDLKKDLITEEKQKi-ATT-SKT--PFYYSTKKVKKML--RDKERDAIEaalqssain 228 Bab...
Q4U8J3                   143 EAKRALDRYKAENAHLEKKDELRKLKKSLVKEEMDKiaLT--GKK--PYYFTDKKVKKIY--KEINKKKIEesmkstain 216 The...
Q4N193                   143 EAKRALDRYKSENAHLQKKEELRKLKKSLVQEEKNKisLT--GKK--PYYFSDKKVKKIY--KEMNKKKIEeslkstein 216 The...
XP_001309958              91 EFKKRLQSLKDQHKTMASKIDDVNASIQWHREERQR--IAE-GKR--PFWMGKQDMKLMQ--QKKKFDELQ--------- 154 Tri...
WGS:AAFB:cds.EHI_007980A  80 KLIKKRQQLNQRITMQKKYKNEEIIKRGLVEENHKR--IIE-GKQ--PKFLSKQELKEEV--DKQTYGD----------- 141 Ent...
XP_008103133             296 LQQLLKRMTQQEDAQRKQQKERERDLAFKKKQRELA--QQG-KKP--FYLKKSDKQKLEL--AEKYKELKR--------- 359 gre...
XP_001462941             206 --KGGkaAVDRYVIRKRKK 222 Leishmania infantum JPCM5
Q4DLV7                   196 --KGGkgAVEKYVGRKSRR 212 Trypanosoma cruzi
EFC44684                 286 --KSG--KMNKFIKKTKRK 300 Naegleria gruberi
CAQ38048                 160 ----------KKAVKKEKR 168 Plasmodium knowlesi strain H
XP_001612070             229 adGAG--KIHKKVSKESRR 245 Babesia bovis T2Bo
Q4U8J3                   217 ygPNK--AIHKKLESQSRR 233 Theileria annulata
Q4N193                   217 ygPNK--AIHKKLESQSRR 233 Theileria parva
XP_001309958             155 --STG--RLNAYLKKRNKK 169 Trichomonas vaginalis G3
WGS:AAFB:cds.EHI_007980A 142 -------QLKKVEEKRIKR 153 Entamoeba histolytica HM-1:IMSS
XP_008103133             360 --SGK--LENFLSKKRKRN 374 green anole
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