Conserved Protein Domain Family
ExoD
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pfam06055: ExoD 
Exopolysaccharide synthesis, ExoD
Among the bacterial genes required for nodule invasion are the exo genes. These genes are involved in the production of an extracellular polysaccharide. Mutations in the exoD result in altered exopolysaccharide production and defects in nodule invasion.
Links
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Statistics
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PSSM-Id: 399211
Aligned: 150 rows
Threshold Bit Score: 95.2549
Threshold Setting Gi: 123526002
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
Q1GD09          9 EDVLDQTDALLREGAd-gLRVSDLMDELGVKSIAAVLLAPSLALVSPLSGi-PLFSSACGVTIALISVQMLMGRNHLWMP 86  Ruegeria sp. T...
jgi:Hbal_2031   8 RSVLDDIENKSDKSD---TNLKSLIEAFGAKSFGPVLTLIGLLALSPFGAi-PGVPVGLAIVTILIAGQIILGRDHLWLP 83  Hirschia balti...
WP_012531753    9 EEMLDRIGESSDDEGr--VTLGSIVESVGGRSFGPLLLLVGVIMTSPLSGm-PGIPTTMGILVVLIAGQLLFGKDHFWLP 85  Geobacter bemi...
WP_014704466   11 EQLLDCLAEAAEKNRngkVSIATIMEMIGHRSFGPLLLLAGLVILAPVIGdiPGVPTIMAFFVLLMAIQLLLGQQHFWLP 90  Methylophaga f...
Q1QTZ3         13 SQLLDRIGQAPRTDAe-rIRLGEMLQAVGQGSFGPLLLVPGVITLLPLVGdiPGVPTLMALLVLLVAGQLLVGRRTFWLP 91  Chromohalobact...
Q21J88          8 YDLLEEIDNATEGD----LTLGDVTDSLKSQGFGPLIFIVAVAAILPTGAi-PMVPTLCAVVISIFSIQLLFGASGPWLP 82  Saccharophagus...
WP_013783846    6 SGLLDKLVDESDNEK---QSAGEIIARFEDRGFGPLLLIPSLIALLPTGVi-PGVPSICGITLFLICIQVAIGRNAPWLP 81  Alteromonas na...
WP_013300815   12 EDILDEAIDKTDGGC---ASVQDILDSFGSQSLGPVILLAGMIVIIPVIGaiPGVPSIVGLSVFLFSVQFLVGKRSIWLP 88  Parvularcula b...
Q1QUL0          8 TQLLEKLDDANDGRT---IHLQDVVDTFQSRGFGPLVTLPALLALLPTGGv-PGVPTLCAIFIALIAVQQLFGRQSPWLP 83  Chromohalobact...
BAM03893       15 EDVLDTLKEEADGQEdgrLTLGEVIDAFRHRPAGTLLLVPAVVMVSPLGAi-PSVPTVTAALVALIAAQMLFARSTPWVP 93  Phycisphaera m...

Q1GD09         87 EVLSKRSLPADKTQYAIRALRAFAAWLDRRFKRRLTSLLTPPFLRVIQGICLLCGLIMPfleIvPFTSSILGGVVALLAL 166 Ruegeria sp. T...
jgi:Hbal_2031  84 DFINSMKLKAGTINKADKKIGRIPDFLDSLLQPRLKWAVGNTAVKLAAAFCILLSLLMIpleIvPFAVAIPAAGLVLIGL 163 Hirschia balti...
WP_012531753   86 RWVLKRSLEQQKICKAIDWLRPPARFVDRWLRPRLPAFIKGWRIHLISFFCVAIGAVMPimeVvPFSAHAAGLALTAFGL 165 Geobacter bemi...
WP_014704466   91 NWLQERAIDSDKLSKAIDWLRKPARFIDKLIQPRLLILVSGKAKYAIASAAIMIALLLPfmeViPFSANAAGIALLAFGL 170 Methylophaga f...
Q1QTZ3         92 QWLLKRSVPHGKLDRALTWMHKPARVIDRGLKPRLTWLTQRAGTYLIALFCFLIALAMPlmeVvPFSANGAGLALMMFGL 171 Chromohalobact...
Q21J88         83 KFLRDRSIKRSTFTKAKQKAQGFAKKLDKLISKRHEHLFTQFSIKLTAVCMLFLSFVIPpmeImPFLAALPATAIALFAL 162 Saccharophagus...
WP_013783846   82 NKITKQEIDQKKLENAVERAKPYVKKTEKLLKPRITALSNTPGKNIVAGYCALASLCMIpleViPFAVALPALGLTLTAI 161 Alteromonas na...
WP_013300815   89 EAIRTASIERQKLKTAQEKAAPFLRWADTLFTERLTFMSSSVMERVSAGVVTALAAAMIpmeLiPGAVAVPGWAMIFFGV 168 Parvularcula b...
Q1QUL0         84 RKLRERGISHDKLHRSVERVRPWTRRIDRLLAQRLDILLQPVARRFIAVLVIALALAMIpleLlPFAAAMPALAITVIGL 163 Chromohalobact...
BAM03893       94 GFLRHRGLAPERVISAVDKSRPVARFLDRFIRPRLQPLTGEIGRRVIAIVCVLLSVLTPpleLvPFAVYLPGTAILLLSL 173 Phycisphaera m...

Q1GD09        167 SMLIGDGLIALvtvagLGLALGGAA 191 Ruegeria sp. TM1040
jgi:Hbal_2031 164 ALVASDGVFML-----GGFFVGIMS 183 Hirschia baltica ATCC 49814
WP_012531753  166 ALIARDGLLAL-----ISFLVIGLS 185 Geobacter bemidjiensis
WP_014704466  171 ALIARDGVLAL-----LSFVVTALT 190 Methylophaga frappieri
Q1QTZ3        172 SLMANDGLWAL-----LALILTGGT 191 Chromohalobacter salexigens DSM 3043
Q21J88        163 ALIARDGIIFV-----AAYVLAATA 182 Saccharophagus degradans 2-40
WP_013783846  162 GMTNRDGAFIS-----LGMILQLGT 181 Alteromonas naphthalenivorans
WP_013300815  169 GLMARDGLMLI-----LAFLASLGT 188 Parvularcula bermudensis
Q1QUL0        164 GMTADDGLLLL-----IGVLLAAGL 183 Chromohalobacter salexigens DSM 3043
BAM03893      174 ALVGRDGLLAA-----VGLALAAAG 193 Phycisphaera mikurensis NBRC 102666
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