Conserved Protein Domain Family
Nop52

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pfam05997: Nop52 
Nucleolar protein,Nop52
Nop52 believed to be involved in the generation of 28S rRNA.
Statistics
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PSSM-Id: 399178
Aligned: 125 rows
Threshold Bit Score: 136.938
Threshold Setting Gi: 557736442
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
CCF50301       46 LGKALASTEKRIRDSAVRSLHSFLATNGah----------------------tI-PELELQKLWKGLFYCFWMSDK--PL 100  Ustilago hordei
EFC46128       55 LTKDLAATDEGFRTRAAERFPTFLKETKfnkl-------------------dldtNFIDFRKLWKGALYGFWLCDG--EF 113  Naegleria gru...
XP_002140253   11 LGKTMTSIHANSRRRGLQIIEKFILKHKss------------------------lNSLQMIKLWKGLYYCLWLADK--VP 64   Cryptosporidi...
Q5CR59         15 LSKTLTSISPASRKKGLDIITRYISKHNns------------------------mTRLQMLKIWKGLYYSMWLSDK--VL 68   Cryptosporidi...
ESS32435       52 MARLLAHTDVKYRNRGLKRVEAFLSGVSrrrrakqaegvcevnaaerkaasspL-PFSQYEKVWTTLYYAAWLSDK--PL 128  Toxoplasma go...
Q8I2K4         15 IFVELCHVEKENRDKGIDILYDYITKNRkc------------------------lNEHKITYICKGLFYYYWLCYS--ME 68   Plasmodium fa...
EDL42348       19 LFVDLCHVNKEKRDTGIKALTDYIKKKKvp------------------------lDGQHLAYICKGLFYYYWLCYS--LE 72   malaria paras...
XP_001611825    9 LCHMLASCEESTRSQALNSISELFSEVTc------------------------LvDELTLLKLTKALYFMLWLTDK--PL 62   Babesia bovis...
A0DRZ8          8 FLQQITLLDPMNRKQTITELKKVLTKPL---------------------------LISDFKKIWKALYYAMWSSDK--YQ 58   Paramecium te...
EHY56206       12 pVKDLASSEPSVRRACLKTIISHLTERAas---------------------spL-TSTQCLQLWRGLYVALYMHDSknAL 69   Exophiala der...
CCF50301      101 IQQRLANDLAQLVLVhpscstsftsstct---tspgeeggmseraLAGLKFLEAFWDTIVSEWGALDKHRIDKFYLLVRR 177  Ustilago hordei
EFC46128      114 KQHEMAQLLAECIHHvkgge---------------------ssphELPIAFLRAFFDELFETWPRLDKHRMDKYLMLVRK 172  Naegleria gru...
XP_002140253   65 IQREIAINISKFQRLfa--------------------------svELWNSFIYEFYNMLTQRWDIIDRLRMDKFMFLQRV 118  Cryptosporidi...
Q5CR59         69 IQREIAVNISQLQKRfe--------------------------vkEYLFSFIEEFYLMMRFRWDGMDHYRMDKFTFLQRT 122  Cryptosporidi...
ESS32435      129 VQRELFVCLALLERIlp--------------------------tfAEKRKFFKAFFLVMKSNWDKLDCIRVNKFLLLEKI 182  Toxoplasma go...
Q8I2K4         69 EQKKCSLKICRLIHKfnskn---------------------nkkkKNVFLFVQCFLQVMSNKYDNLDIHRLNKYLFLFRV 127  Plasmodium fa...
EDL42348       73 EQKTAACKISKILRNidevd--------------------dseekKSVFLFLQSFLMVMSSKYDSLDLYRLNKFLFLFRV 132  malaria paras...
XP_001611825   63 KVRKVAVTIADSQSHfv--------------------------drRNRFAFFDALFKSMSMEWPNLDKNRVDKMLLFVRI 116  Babesia bovis...
A0DRZ8         59 NQQILATEISQLTRMfys-------------------------nfTAFIQFSRAMFHVFMLEWEKIDYWRINKFMLLFRE 113  Paramecium te...
EHY56206       70 SVQQLAAELAATVKLmaakdeeatssgeddensngnsksnsnnspSWLDTWATAFWETICREWTTIDQWRMNKVLMLVRF 149  Exophiala der...
CCF50301      178 FVASGFQLLAE-------EGWNL-DAT----RRFAQ-ILGKFqggvlst--------------------------ndpkv 218  Ustilago hordei
EFC46128      173 VMQQAFVFLNKt------AQYKL-EAV----EEFIEfILEDGifnne-----------------------------erkl 212  Naegleria gru...
XP_002140253  119 MIAESLDIIKK-------SEYDK-VYIehllNTYKMcIFTts-------------------------------------- 152  Cryptosporidi...
Q5CR59        123 MLAESLNLLSK-------KNFDP-EFAkgllDVYRRcLFVENidnensigkkrkflmisdhigsgdevdpsinsysnrst 194  Cryptosporidi...
ESS32435      183 MVAELMHLSFQ-------VAHRPhKFVypmgRFLAErILLDErg------------------------------------ 219  Toxoplasma go...
Q8I2K4        128 FQAEILMFFHI-------NAWNN-LYLkkynKIFLQ-YFDDT-------------------------------------- 160  Plasmodium fa...
EDL42348      133 FQAEFLLFLHR-------HSWRS-YYIrrynQIMVR-MFDDT-------------------------------------- 165  malaria paras...
XP_001611825  117 VLAALLELLNN-------GKWDL-NEI----NRFNDiVLNKEgifh--------------------------------kr 152  Babesia bovis...
A0DRZ8        114 IIEEQIKICKH-------FNW---KTVpqliALYNEtVLNLTefq----------------------------------t 149  Paramecium te...
EHY56206      150 FLRETFNVCFTaiandtdST-NSkDLV----LRQKQ-ILETWplspr-----------------------------erkv 194  Exophiala der...
CCF50301      219 pDSLTYHLSDIYLDELEK-VIEQVDNSQNEEEkqeqeqeeqeqeeqeqeeqeqeeqeqeeqeqeeqeqeeqedlplipTL 297  Ustilago hordei
EFC46128      213 lASLQIHIAELFFLELVQ-YGGPQVENDSDYHlne-----------------------------------------daLM 250  Naegleria gru...
XP_002140253  153 sIGISLIFCHQFPQEFVY-FLNSQFSEKKCNYersn--------------------------------------invlFE 193  Cryptosporidi...
Q5CR59        195 gIGVSLIFCKQFPQESVY-------------------------------------------------------------- 212  Cryptosporidi...
ESS32435      220 gNGLAHQLGLYFLLEFREvRARVTASDASVASdqdatdsddgddas------------------ltatgeqessrdalFF 281  Toxoplasma go...
Q8I2K4        161 -SELYYNYIDTFIKEFLGnEYFLKSKKQEQRNynt-----------------------------------------kqFL 198  Plasmodium fa...
EDL42348      166 -NDVYYNHIDTFFKEFFGnQFYLKAKDQNEKVhi------------------------------------------knFL 202  malaria paras...
XP_001611825  153 sAGLAFQFIQVFFEEFEAnRVEFDKTNSWSELsa------------------------------------------igYL 190  Babesia bovis...
A0DRZ8        150 vQGAALHFIQIFVQCMAKhMSDSTVSYVQVK------------------------------------------------- 180  Paramecium te...
EHY56206      195 pDGLRLHVLDVWVDELLGqLDVVRQSGTVDDDdnav---------------------------------------aasLQ 235  Exophiala der...
CCF50301      298 ELLKPFVDALATAKSKAMYER 318  Ustilago hordei
EFC46128      251 KFVQFFIKDFASTENNSIKKT 271  Naegleria gruberi
XP_002140253  194 LIAELFVNIIRDCNNRVVIKT 214  Cryptosporidium muris RN66
Q5CR59        213 LLYEQYKLIKENPSNKNLLNE 233  Cryptosporidium parvum
ESS32435      282 AFFFPFFYAACFSQSPAMLRA 302  Toxoplasma gondii VEG
Q8I2K4        199 LLIDPFFKIICMTDQKYVMDL 219  Plasmodium falciparum 3D7
EDL42348      203 LLMDFFFKIICKTEKKHIIDV 223  malaria parasite P. vivax
XP_001611825  191 HLMKPFLHLTLLNDNRHLMKT 211  Babesia bovis T2Bo
A0DRZ8        181 ELLEGFLDILKHSPNKTLRDK 201  Paramecium tetraurelia
EHY56206      236 QVAQDFMTPVETISRQALSKG 256  Exophiala dermatitidis NIH/UT8656
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