3BT7


Conserved Protein Domain Family
tRNA_U5-meth_tr

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pfam05958: tRNA_U5-meth_tr 
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tRNA (Uracil-5-)-methyltransferase
This family consists of (Uracil-5-)-methyltransferases EC:2.1.1.35 from bacteria, archaea and eukaryotes. A 5-methyluridine (m(5)U) residue at position 54 is a conserved feature of bacterial and eukaryotic tRNAs. The methylation of U54 is catalyzed by the tRNA(m5U54)methyltransferase, which in Saccharomyces cerevisiae is encoded by the nonessential TRM2 gene. It is thought that tRNA modification enzymes might have a role in tRNA maturation not necessarily linked to their known catalytic activity.
Statistics
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PSSM-Id: 428692
Aligned: 8 rows
Threshold Bit Score: 568.994
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3BT7_A  13 QYEAQLAEKVVRLQSMMAPFSDLVPEVFRSPVSHYRMRAEFRIWHD--GDDLYHIIFDQQTK----SRIRVDSFPAASEL 86 
Q9HV78  10 AYAAQLEDKKSRLAGLLAPFAAPAPEVFESPREHYRLRAEFRLWREtgNEKRHYAMFEQGDKh---TPILLEDFPIASRR 86  Pseudomonas aeruginos...
Q8CX51  10 TYDAQLEAKRIKLEQAFAQFETPSIEVFASDPEHYRMRAEFRVWHE--GDDLYYYMFDKALN----DKVRCDQYLPASTL 83  Shewanella oneidensis...
Q8ZAA0  10 SYDHQLAEKSARLKAMMLPFQAPEPEIFRSPADHYRMRAEFRVWHD--EDDLYHIMFDQQTK----QRIRVEQFPVASRL 83  Yersinia pestis
P22038  10 QYEAQLAEKVARLQSMMAPFSGLVPEVFRSPVSHYRMRAEFRLWHD--GDDLYHIMFDQQTK----SRIRVDTFPAASQL 83  Salmonella enterica s...
Q9PP92   7 GNFLTLDEKHSFIKKYFKEFYTKDFKLFASKDKHYRTRAELSFYHE--NDTLFYAMFDPKSK----KKYIIEYLDFADEK 80  Campylobacter jejuni ...
Q5F757   3 DYTQQLQGKKDYLKTLFAGLDVPEWEVYESPDKHYRMRAEFRIWHE--GGEMFYAMFEKGQKasgaSLIRCDRFDAASEA 80  Neisseria gonorrhoeae...
P31812   7 QYNELLQKKLEKLTALLHPFNAPDIQVFDSPTSHYRMRAEFRIWHE--QDDFYHIMFDQATL----QRYRVDEFPIASML 80  Haemophilus influenza...
3BT7_A  87 INQLMTAMIAGVrNNPVLRHKLFQIDYLTTLSNQAVVSLLYHKKLDDEWRQEAEALRDalraqNLNVHLIGRATKTKIEL 166
Q9HV78  87 INELMPRLKAAW-ADPALGFKLFQVEFLTTLAGDALITLCYHRPIDDAWRQAAEKLAA-----ELGVNLVGRSRGKRIVV 160 Pseudomonas aeruginos...
Q8CX51  84 INEMMAALIAELkPNPSLRHKLFQVDFLSTLSGEILVSLLYHRQLDDQWRAEAIALKAkls-sqFKVNIIGRARKQKIDL 162 Shewanella oneidensis...
Q8ZAA0  84 INRLMDALMTAIrAEPLLRRKLFQIDYLSTLSGKLIASLLYHRQLDEEWQQKALELRDqlraqGFDLQLIGRAAKTKIML 163 Yersinia pestis
P22038  84 INTLMKAMIAGVrDNHALRHKLFQIDYLTTLSNQAVVSLLYHKKLDEEWREAATALRDalraqGLNVHLIGRATKTKIEL 163 Salmonella enterica s...
Q9PP92  81 ICAFMPRLLEYLrQDNKLKEKLFGVEFLTT-KQELSITLLYHKNIEDI-KSNLENLSN-----ILHINLIARSKGKKLIF 153 Campylobacter jejuni ...
Q5F757  81 VNCLMPELIAVAaQSAELRNHWYAVEFLSTLSGEMLVTMIYHKRLDDEWMKAAQALQQ-----QLDISVIGRSRGQKIVL 155 Neisseria gonorrhoeae...
P31812  81 INRMMQTLLPLLkQQEVLHKKLFQIDYLSTLSNKIIVSLLYHKTLTEEWESAAKNLKDllekqDFDVQIIGRASKQKICF 160 Haemophilus influenza...
3BT7_A 167 DQDYIDERLPVAGKEMIYRQVENSFTQPNAAMNIQMLEWALDVTKGSKG-DLLELYCGNGNFSLALARNFDRVLATEIAK 245
Q9HV78 161 GRDYVEEELSVAGRRFRYRQPEGAFTQPNGEVNQKMLGWAYEALGQRDD-DLLELYCGNGNFTLPLATRVRKVLATEISK 239 Pseudomonas aeruginos...
Q8CX51 163 DKDFVVESLQVNDKVFHYKQIENSFTQPNAKVAIKMLEWAIDVTQNSQG-DLLELYCGNGNFSIALAQNFNRVLATELAK 241 Shewanella oneidensis...
Q8ZAA0 164 DHDYIDEVLPVAGREMIYRQVENSFTQPNAAVNIHMLEWALDVTQGATG-DLLELYCGNGNFSLALARNFERVLATEIAK 242 Yersinia pestis
P22038 164 DQDYIDERLPVAGKEMIYRQVENSFTQPNAAMNIQMLEWALEVTKDSKG-DLLELYCGNGNFSLALARNFNRVLATEIAK 242 Salmonella enterica s...
Q9PP92 154 KTENLRQTLNIQDRKIFYEFNNDCFIQPNTAINEKMITWVCEILNTQKRmDLLELYCGYGNFTLALAPFFFKILATEISK 233 Campylobacter jejuni ...
Q5F757 156 KQDYVTETLRVGDRDFHYRQIEGSFTQPNAAVCRKMLEWACRAAEGLGG-DLLELYCGNGNFTLPLSRYFRQVLATEISK 234 Neisseria gonorrhoeae...
P31812 161 EQDYVDEVLPVNGRNYVYRQVENSFTQPNATVNCKMLEWAIDCTQNSEG-DLLELYCGNGNFSIALAQNFRKVLATEIAK 239 Haemophilus influenza...
3BT7_A 246 PSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQ--GIDLKSYQCETIFVDPPRSGLDSETEKMVQAYPRIL 323
Q9HV78 240 SSVNAALANLADNAVDNVSLVRLSAEELTQALNEVRPFRRLA--DIDLKSYAFGSVFVDPPRAGMDPDTCELARRFERIL 317 Pseudomonas aeruginos...
Q8CX51 242 PSVDAAQYNIEINGIDNLQIIRMSAEEFSDAMAKKRSFRRLE--GIDLDSYLCNTIFVDPPRAGIDPATLDLVQGYERIL 319 Shewanella oneidensis...
Q8ZAA0 243 PSVAAAQYNIAANNIDNVQIIRMSAEEFTQAMQGVREFNRLK--GIDLGSYNCETIFVDPPRSGLDHETVKLVQAYPRIL 320 Yersinia pestis
P22038 243 PSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQ--GIDLKRYQCETIFVDPPRSGLDSETEKMVQAYPRIL 320 Salmonella enterica s...
Q9PP92 234 SNINFALKNCELNNTTNIHFARLSSEELSLAIKKEREFFRLK--DIRLDDFNFSHVLVDPPRAGLDKSVIDLIKKYGNII 311 Campylobacter jejuni ...
Q5F757 235 TSVSAAQWNIEANWIGNIKIARLSAEEFTEAYTGKREFTRLKesGIVLTDYAFSTIFVDPPRAGIDEETLKLVSQFDNII 314 Neisseria gonorrhoeae...
P31812 240 PSVAAAQFNIAENKVDNLQIIRMSAEEFTQAMNGVRAFNRLK--GIDLKSYECNTIFVDPPRAGLDPDTVKLVQNYDRIL 317 Haemophilus influenza...
3BT7_A 324 YISCNPETLCKNLETLSQTHKVERLALFDQFPYTHHMQCGVLLTAK 369
Q9HV78 318 YISCNPETLAQNIAQLHDTHRISRCALFDQFPYTHHMESGVLLERR 363 Pseudomonas aeruginosa PAO1
Q8CX51 320 YISCNPDTLKDNLQQLYKTHKVTRFALFDQFPYTDHMETGVLLERI 365 Shewanella oneidensis MR-1
Q8ZAA0 321 YISCNPETLCANLEQLQHTHKISRLALFDQFPYTHHMECGVLLEKR 366 Yersinia pestis
P22038 321 YISCNPETLCKNLETLSQTHTVSRLALFDQFPYTHHMECGVLLTAr 366 Salmonella enterica subsp. enterica serovar Typhimurium...
Q9PP92 312 YISCNPMTLKENLKELSLTHRVEEFALFDQFVNTPHLECGVFLSKV 357 Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 70...
Q5F757 315 YISCNPETLRANLDTLTETHTVGRAALFDQFPFTHHIESGVLLKKK 360 Neisseria gonorrhoeae FA 1090
P31812 318 YISCNPHTLCDNLVELSKTHRIEKAALFDQFPYTDHMESGLWLIRK 363 Haemophilus influenzae Rd KW20
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