Conserved Protein Domain Family
Penaeidin

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pfam05927: Penaeidin 
Penaeidin
This family consists of several isoforms of the penaeidin protein which is specific to shrimps. Penaeidins, a unique family of antimicrobial peptides (AMPs) with both proline and cysteine-rich domains, were initially identified in the hemolymph of the Pacific white shrimp, Litopenaeus vannamei.
Statistics
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PSSM-Id: 147854
View PSSM: pfam05927
Aligned: 8 rows
Threshold Bit Score: 72.8889
Threshold Setting Gi: 25090976
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q6V4W4    1 MRLVVCLVFLASFALVCQGQGYKGGYTGPVVRPfvrpigRPFvt-piG-RPVVSG-NVCpLSCRGITTLQARSCCSRLGR 77  blue shrimp
Q4KXB8    1 MRLVVCLVFLASFALVCRGQGYKSGHTGPYPRPly--gsRPI-----GiRPITRPdPSC-AGCRILTLDDAIACCRRLGR 72  Penaeus chinensis
Q962A9    1 MRLVVCLVFLASFALVCQGGAQRGGFTGPIPRP------PPH-----G-RP--PLgPIC-NACYRLSFSDVRICCNFLGK 65  white shrimp
Q3HNH4    1 MRLVVCLVFLASFALVCQGH--SSGYTRPLPKPsrpifiRPI-----G----------C-DVCYGIPSSTARLCCFRYGD 62  Pacific white shrimp
ABO93321  1 MRLVVCLVFLASFALVCQGHGYKSGYTRPFSRP-------PF-----G-GIYRPVrPVC-NACYRLSYSDALNCCTRFGS 66  southern brown shrimp
Q6H2Z5    1 MRLVVCLVFLASFALVCQAQGYQGGYTRPFPRP-------PY-----G-GGYHPV-PVC-TSCHRLSPLQARACCRQLGR 65  black tiger shrimp
ABC33920  1 MRLVVCLVFLASFALVCQGQ--KSGYTRPISRP-------PY-----G-GGYG---NVC-TSCHVLTTSQARSCCSRFGR 61  Penaeus chinensis
Q963D9    1 MRLVVCLVFLASFALVCQGQVYKGGYTRPVPRP-------PFvrplpG-GPIGPY-NGCpVSCRGISFSQARSCCSRLGR 71  Pacific white shrimp
Q6V4W4   78 CCREAKG 84  blue shrimp
Q4KXB8   73 CCSALKG 79  Penaeus chinensis
Q962A9   66 CCHLVKG 72  white shrimp
Q3HNH4   63 CCH--RG 67  Pacific white shrimp
ABO93321 67 CCHIRKG 73  southern brown shrimp
Q6H2Z5   66 CCDAKQT 72  black tiger shrimp
ABC33920 62 CCVPRRG 68  Penaeus chinensis
Q963D9   72 CCHVGKG 78  Pacific white shrimp
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