1T23


Conserved Protein Domain Family
MC1

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pfam05854: MC1 
Non-histone chromosomal protein MC1
This family consists of archaeal chromosomal protein MC1 sequences which protect DNA against thermal denaturation.
Statistics
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PSSM-Id: 399096
Aligned: 14 rows
Threshold Bit Score: 129.1
Threshold Setting Gi: 282156485
Created: 20-Apr-2021
Updated: 29-Sep-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1T23_A            2 N-TRNFVLRdEDGNEHGVFTGKQPRQAALKAANRGSGT-------KanP--DIIRLRERGTKKVHVFKAWKEIVDAPKNR 71  Methanosarci...
bsuwp:MCON_1667   3 E-MRNFALRdAQGNEIGVFTGKSPRQAALKAANRGYTE---------------IKLRERGTKKVHIFSGERVQVDKPAGA 66  Methanothrix...
bsuwp:MCON_2911  19 E-KRNFALRdKEGNEIGVFSGKQPRQAALKAANRGFTD---------------IRLRERGTKKVHIFQGERIQVPKPSNA 82  Methanothrix...
BAI61573         48 E-KKNFGLInEKGEEIGTYSGAQPRDAALKVANRGITS---------------IVLREKGTKKLHYFQGKRELVSVPASA 111 Methanocella...
BAI61212          5 E-KKNFGLLnENGEEIGTFTGAQPRDAALKVANKNITK---------------IILREKGTKKLHFFKGERKQVPKPANS 68  Methanocella...
WP_013719696      3 E-KRNFALRdASGNEVGIYTGMAPRQAALKVASRGVKD---------------IRLRERGTKKVHIYQGNRRKVKKPKNA 66  Methanothrix...
CAI48303          7 DdKRNFALReQNGDEPSVFSGRTPRQAALKAARRLDPAgse-dnaD--E--TELRLREKGTKKVHIYQGWAWEETAPNDS 81  Natronomonas...
WP_013878687      5 DgKRNFALRdSDGEETSVFSGNTPRQAALKAARRLEPGsse-adaD--R--VELKLREKGTDKVHIYEGWAWEQTAPDDK 79  Halopiger xa...
Q9HMK1            5 DgKRNFALRtDDGTEPSVFSGNTPRQAALKAARRLDDVgeseseaD--R--NRIELREKGTDKIHIYEAWAWEETAPDDK 80  Halobacteriu...
ELY26284          5 DgKRNFVLReENGTESSVFSGSMPRQAALKAARRLDPVdse-dkaR--EqaTEIRLREKGTDKVHIFDAWAWVDDAPDDK 81  Halogeometri...
1T23_A           72 PAWMP-------EKISKPFVKKERIEKLE 93  Methanosarcina thermophila
bsuwp:MCON_1667  67 PAWMP-------DKIWKPKVKKEGIEKLD 88  Methanothrix soehngenii GP6
bsuwp:MCON_2911  83 PKWMP-------ANIWKPNVKKLGVEKLE 104 Methanothrix soehngenii GP6
BAI61573        112 PAWIKeaakdkgGKIYKANVEKLGTTNLe 140 Methanocella paludicola SANAE
BAI61212         69 PAWLP-------AKIWKASVEKIGIKHIq 90  Methanocella paludicola SANAE
WP_013719696     67 PAWMP-------DKIWKPTVKKIGIEKLE 88  Methanothrix soehngenii
CAI48303         82 PDWMP-------EEITEANVSKEGIQHLE 103 Natronomonas pharaonis DSM 2160
WP_013878687     80 PDWMP-------DEITEANVSKQGIEHLE 101 Halopiger xanaduensis
Q9HMK1           81 PDWMP-------GDITKANVSKQGIDHRE 102 Halobacterium salinarum
ELY26284         82 PDWME-------GDITKGNVSKQGIEHLE 103 Halogeometricum borinquense DSM 11551
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