Conserved Protein Domain Family
ATP-synt_S1

?
pfam05827: ATP-synt_S1 
Vacuolar ATP synthase subunit S1 (ATP6S1)
This family consists of eukaryotic vacuolar ATP synthase subunit S1 proteins. The threshold is set high to avoid the inclusion of BIG1 ER integral membrane proteins which are involved in cell wall organisation and biogenesis.
Statistics
?
PSSM-Id: 399083
Aligned: 32 rows
Threshold Bit Score: 117.8
Threshold Setting Gi: 194201403
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
XP_003963653 314 ITLSFFMSqRFFPVSARNWFTLNSVQL--RSN-----GMT-ATFIGSRGIYAPAEYSYHCQSVSSSQddALLvlssaNQS 385 torafugu
XP_015787220 117 IDLDLT----ITSNKANRYWIVDKASIkiDSQefnlkATE---------LTAADTFSFSCSSAIVQSikSSK-----DTS 178 two-spotted spi...
EDX14979      38 LRFKFSL--I------RGSWTLRNVEV--EYRel--kSVLvARGDEYTLPSAPLGFSYRCSAESVNFlnP-------ARN 98  Drosophila simu...
1_pfamImport   1 LILHFNIFiRFNFTKSGGYWSLQAANI--DYNnaqinSIL-PISRRSCLPEAPIGFSYRCSSSDLFF------------N 65 
XP_016026656 244 ITFDVV--------YNGGYFSLSNL----VYDnsnfrSSG---------VNAPTTFSYSCGNLTLESs---------AVN 293 Drosophila simu...
6_pfamImport   1 ITFSIEL-------DYAGYFEMQNLKL------------GqNTFRVNPAVNSPTTFSYFCGNKTFYQy---------GEG 52 
EGI69110     230 LTLEF-----FFEVKSAGYYTLNKVTTng------------vDLFTKRDISFPFGFSYHCSPKTTFT------------- 279 Panamanian leaf...
EFN71595     239 LTLDF-----FFPIKYMGYYTLDKVNYet-------kGGKnGVLSSKRDICFPYNFSYHCSLQTIFT------------- 293 Florida carpent...
EFN87074       7 LTLEF-----FFSVKSMGYYMLKKVHYet-------sSTS-DFLETKLDIYFPYNFSYHCSQNVVFI------------- 60  Jerdon's jumpin...
EEB17209     254 ISVKFD-----FSSGDNDWWSLDSAEI----------LHSkQTLNPTEEVGAPYDYSYFCNPSIVFS------------- 305 human body louse
XP_003963653 386 TSAWRLDFVDFQIQGF------GLAnGTNFSYASDCAGFFTPGIWMALLTSLILLLIFIYGVHMIMQLNTMDRFDDPKGP 459 torafugu
XP_015787220 179 KDFAIVQIKRLQLQPFk-----AKNtKEHFTYSYDCATWFTLGTWMGLLALLLFISIVSFGVYMLSTIETMDRFENPKAK 253 two-spotted spi...
EDX14979      99 ETIQSLLLSDFQVQPW-------LNgRPEYGEVYDCIGFVSAPILAGLFVVTLLLGILGLGISAMLSMHTPNRFESSRSK 171 Drosophila simu...
1_pfamImport  66 GTDGNLTIKDFQVQPW-------TK-DSSFSDAYNCVGFVTIPILSGLFICSIVIGILSVGINLLMSIKTPTKFDNNRSK 137
XP_016026656 294 NMYNTLSFKSLQLQAPfd---gSYKeNFAFGDSWDCVGFVTPGILMGLFVVLLLLVIMFVGVCWMMDINTMDRFDDPKGK 370 Drosophila simu...
6_pfamImport  53 ANTLSLSFNVLQMQAPfgaknfPINdNFAFGDPWHCVPFVSIPILAGLFVCAILLAILAAGICWLMDINTMDRFDDPKGK 132
EGI69110     280 DGTTFLSITDMQVQVD-------HK-DATFSDAYDCVGFTSIPIWTGIFVTIILGLIMIWALTMIMDIRTMDRFDDPKGK 351 Panamanian leaf...
EFN71595     294 NGPVRLNITDMQVEVD-------HK-NAVFSDAYDCVGFTSIPIWTGIFVTAILALIMIWALTMILDIRTMDRFDDPKGK 365 Florida carpent...
EFN87074      61 NDMVYLNITNIQVQID-------SK-DATFNDAYDCVGFTSIPIWTGIFVTAILASIMTWALIMIMDIRTMDRFDDPKGK 132 Jerdon's jumpin...
EEB17209     306 SKEASLTFDNFQVQPR------VGK-GNSFGPVMHCIPYFSIAIWSGIVIVAILSIVLAWGIVMIMDINTNDRFDDPKGK 378 human body louse
XP_003963653 460 SISVPQ 465 torafugu
XP_015787220 254 PLSIPV 259 two-spotted spider mite
EDX14979     172 QLTFTI 177 Drosophila simulans
1_pfamImport 138 QLSFTV 143
XP_016026656 371 TITINA 376 Drosophila simulans
6_pfamImport 133 TITINA 138
EGI69110     352 TITISS 357 Panamanian leafcutter ant
EFN71595     366 TITISS 371 Florida carpenter ant
EFN87074     133 TITISA 138 Jerdon's jumping ant
EEB17209     379 TITITA 384 human body louse
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap