Conserved Protein Domain Family
TnpB_IS66

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pfam05717: TnpB_IS66 
IS66 Orf2 like protein
This protein is found in insertion sequences related to IS66. The function of these proteins is uncertain, but they are probably essential for transposition.
Statistics
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PSSM-Id: 399027
Aligned: 171 rows
Threshold Bit Score: 98.693
Threshold Setting Gi: 547323290
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_011765760     2 YSEAVDMRKSIDALAQLVASC-MGMDPLSGQ-VFVFIGRRRDKVKLLVWDRHGFWVLYKRLERGRFADPArlAAGALaMS 79  Azoarcus sp. ...
jgi:Sph21_4929  13 YDGHCDMRKSFDGLCGLVISV-MNRQPTSGE-VFVFLNRSRTHIKLLHWEHGGFVLYYKRLEQGTFG------TSSLkKG 84  Sphingobacter...
jgi:Echvi_3898  13 YRSPVDMRKGFNGLSGIVTNE-LDRDPVSGE-VFVFVNRHRNLIKLLHWEKGGFVVYYKRLEKGTFLLP----EDRG-DG 85  Echinicola vi...
WP_022054427    13 FNGNVDLRKGIFRLCESIRED-MSLDPSDASnVYMFMSRNRKVVKILHYERGFYVLYEKRPVMGRFKKPVfdEVSK--CY 89  Bacteroides ilei
WP_022233133    13 CPGRTDMRKGISSLCGVVHEK-MNSEVKNGD-VFIFIGSSRRLMKLLHAEDGGMVMYVKRLEAGRFKLPEydPQSN--SY 88  Bacteroides m...
WP_004294670    13 CPGYTDMRKGMFTLCGLVHER-MGGDIRSGD-VFIFYNRFRTKIKLLHAEPGGLVLYEKLLEEGTFKIPAydPATR--SY 88  Bacteroidales
jgi:Odosp_0528  13 CPGSTDMRKGMFSLSGLIREK-MNGDVRNGD-VYIFINRLKNRIKLLHAETGGLVMYEKLLEEGTFKIPAydPETH--SY 88  Odoribacter s...
jgi:Cycma_1560  13 YDKPTDMRFGINALSGLVRNK-LGFDPMNGD-VFIFIGKRGNQIRLLQWDKDGFALYIKKLERGTFERP-----ILT-GT 84  Cyclobacteriu...
CDC63958         2 CQQPVNMRKGIDALFNLIQSE-SPLSPMTGD-VFVFFSRNRQSVKLLRWDTDGFLLYQKRLEKGSFEQPRlnPSTG--YY 77  Bacteroides s...
wustl:BV1290    13 YQGFVRMNLGIDGLFKIIRSQmKELSPISGD-IFLFFGKNRQSVKILRWDGDGFLLYYKRLEGGSFELPTfnPHTG--NY 89  Bacteroides v...
WP_011765760    80 ELAMSELVAWLDGIDLARVR 99  Azoarcus sp. BH72
jgi:Sph21_4929  85 ELSWSDLVLLIEGVQVVKCI 104 Sphingobacterium sp. 21
jgi:Echvi_3898  86 VLDWPELVLMVAGIQVEGYR 105 Echinicola vietnamensis DSM 17526
WP_022054427    90 RIQWSDMAYLTESIVVDKMy 109 Bacteroides ilei
WP_022233133    89 PMEWRDLVMMVEGIQENPQQ 108 Bacteroides mediterraneensis
WP_004294670    89 PMTWSDLVVMVEGINEDVSK 108 Bacteroidales
jgi:Odosp_0528  89 PMTWSDLVIMVEGINEDKRK 108 Odoribacter splanchnicus DSM 20712
jgi:Cycma_1560  85 AITSTQLSFLLQGVRLESVR 104 Cyclobacterium marinum DSM 745
CDC63958        78 ELSWETFSLIMSGISLDSVR 97  Bacteroides sp. CAG:770
wustl:BV1290    90 EISYQVLSFILNGVSLKSVR 109 Bacteroides vulgatus ATCC 8482
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