Conserved Protein Domain Family
DUF823

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pfam05689: DUF823 
Salmonella repeat of unknown function (DUF823)
This family consists of a series of repeated sequences (of around 180 residues) which are found in Salmonella typhimurium and Salmonella typhi. Sequences from this family are almost always found with pfam05688.
Statistics
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PSSM-Id: 399007
Aligned: 49 rows
Threshold Bit Score: 117.044
Threshold Setting Gi: 1049632119
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
CBJ82914     1737 PDTDLANYWGHMVEELPI----NAGKFSRPLLSKEVQKYYpnlSTGIVQENNEDWSAYNYeNFKNLC---QAKGKRAPQI 1809 Xenorhabdus b...
CBJ79527      859 PDTPLANFWGHMSESVMGa---NGAVFMRPQLQVELKGKMk--GLATFFESGEIWPRRVYkGAEWYC---GKIHANLPTQ 930  Xenorhabdus b...
WP_045959865  877 PDVPVANFWGHMPETVTAa---NGVVFARPQLSAELKKLGh-dSSSPYKENGEIWARLVYkGAVWYC---NAVHKFLPTK 949  Xenorhabdus p...
Q8ZN56        869 PDTPEAQMWGHMADTLTV----GDMKFQRPKLAAEATA-----ATRTQEQDNETWARVSHaDALNNPnagGCEAGHLPRA 939  Salmonella en...
Q8ZN55        860 PDTPAAKMWGHMADTITV----GDWTFERPKLAGEVSN-----PLRTQDESNETWARVAHsDAVGNPdagGCAANRLPRI 930  Salmonella en...
Q8ZN56        326 PDSSSANMYGHMAETSTAtvdgASYTFYRPKLAAETDS-----EDRTASINNETWAQFNWgHADAHC-------DILPDA 393  Salmonella en...
Q8ZN55        330 PDSDKASMYGHMIESATAtlngITYTFTRPKLAAEASG-----ADKSVVDTNETWALFTWsGADNHC-------DILPDA 397  Salmonella en...
AVQ93300      321 PDSDKAAMWGHMEESATAnvdgVTYTFTRPKLAAETSG-----TSATFAANNESWAQFTWdSADNHC-------AILPDA 388  Citrobacter f...
WP_032950918  850 PDTPKAHMWGHMVDVITV----DNLTFERPKLAVEVGA------TRTQDEVNETWARVMHaDALGNTaagGCALNRLPRI 919  Citrobacter f...
WP_051155517  866 PDSPSAQMWGHMSDVITV----GSDVFSRPKLADEAPAAG-----VTQKENNETWARVNHdDASGRVdtgGCALNHLPRL 936  Leminorella g...
CBJ82914     1810 GELQELGGLVqdkyqftPTYGWPTvs---sRSWYRSDTDAPNQGPhlKSSYALDNFKIGKNGPSDI-NMVSCI 1878 Xenorhabdus bovienii...
CBJ79527      931 EDLQSLYRAYsan-emhDLHGWPQh-----RSYRSSTPAEGNKV---HIAVNIDNGFAHPIEDNIVsDYVICR 994  Xenorhabdus bovienii...
WP_045959865  950 EDLEALYNAYpqn-kmyDVYGWPQn-----RAYRSSTSGTDDQGHegHYSVNIDDGQVHFARDGLVpDYVACI 1016 Xenorhabdus poinarii
Q8ZN56        940 DQLAALYASSdgn-kihTVSGWPTe-----YDYWSSTFASAAT----WQAVSLAAGGYTASGDAS--DYVSCL 1000 Salmonella enterica ...
Q8ZN55        931 DQLEALYNANsgg-kihSIQGWPTy-----LNYWSSTYQSATT----WKLIALTNGSEFANSNVS--IYASCL 991  Salmonella enterica ...
Q8ZN56        394 RQLEGLKIARgd---laTTLGWPVgltsgdEEYWSSSQGSTATD---HISIDMRSRALTQMPDATQ-SLVSCV 459  Salmonella enterica ...
Q8ZN55        398 EQLVQMRHEHst---leTWTGWPVag---dAEYWSSTKNQLSGY---HAAVHMNSASVVRAADSDT-LLVSCV 460  Salmonella enterica ...
AVQ93300      389 EQLVALRAAHst---aaAYPGWPId------TYWSSTKDQLDIY---HYATSMGSGAVIRESNSTA-LLVSCV 448  Citrobacter freundii
WP_032950918  920 DQLTTLYNANndg-eihTVAGWPVg-----LNYWSVTYASQSS----WQQISLSGGEVTAGGDVS--DYVSCL 980  Citrobacter freundii
WP_051155517  937 DQLSALYSANsgn-kinTEHGWPVl-----YGYWSSTPAGTST----WKETSLSTGSDTSAPSSAT-DYVSCL 998  Leminorella grimontii
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