Conserved Protein Domain Family
WCOR413

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pfam05562: WCOR413 
Cold acclimation protein WCOR413
This family consists of several WCOR413-like plant cold acclimation proteins.
Statistics
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PSSM-Id: 398931
Aligned: 18 rows
Threshold Bit Score: 179.093
Threshold Setting Gi: 566152722
Created: 20-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q93WS4        11 VTSQA-AAVSLDQDWQAVGEALSNLSSH---ALLAlGLGRTWGDILQWLAVIAAIYLLVLDRTNWRTNLLTALLVPYLAL 86  Physcomitrella ...
XP_002284722  10 RTDTD-TTDLISSDLRDLGNAAKKLATH---AIKL-GGLGFGTTFLEWLASFAAIYLLILDRTNWKTNILTALLIPYIFF 84  wine grape
XP_002313824  22 RRDQGmESSLLASDFQDLTNAAKKLANH---AVKL-GGLGFGTTFLEWIAAFAAIYLLILDRTNWKTNILTGLLIPYIFF 97  black cottonwood
ACU13681       6 gfEEE-AVQLINSDFRDLSLAANRLAHH---AIKL-GGIGFGASFFGLFAAIAAIYLLILDRTNWKTNILTALLIPYIFF 80  soybean
NP_001288966   7 rrdhgtLQAMVGSDLNELATAAKNLANH---TLML-TGLGFGTSILEWIASIAAIYLLVLDRTNWKTNMLTSLLIPYIFF 82  field mustard
XP_004230845  11 GSD------MIDSDLKEIGIAAKKLANH---AIML-GGIGFGTSFLKWIASFAAIYLLILDRTNWRSNILTTLLIPYIFL 80  tomato
EFH43241      10 KTEEN-TANLINSDLNEFVAAAKKLVKD---VGML-GGLGFGTSFLQWAASISAIYLLILDRTNWRTKMLTTLLVPYIFF 84  Arabidopsis lyr...
XP_006369881  50 FNPLR-----LSIKSNEMMMKIKRKESGrgfGAVChAGS-LTTPSLPWISALSSAVLVLAKGT----AVQKSFLVPLFAL 119 black cottonwood
EDQ76847      12 tqpGA-AAMAIDQDWHALGAALSNLGMH---LAAAaGITGSSTGLLQWLAVIAAIYLLVLDRTNWRTNLLTALLVPYLAL 87  Physcomitrella ...
ERN17647      10 KTDEA-NYDILNADFNELGMSARKLAKH---ALAL-GGTGLGTAILKWFATFAAIYLLILDRTNWRTNMLTALLVPYIFF 84  Amborella trich...
Q93WS4        87 QLPGFIFDFLRGNVGLWIAFIAVVIRLFFASQLPQSihgdLELPAAFILLIVTAPKLLVE-YRTSVYAEVISVIIGAYLL 165 Physcomitrella ...
XP_002284722  85 SLPSILFNFFSGQVGKWIAFIAVVLRLFFPKRFPDW----LEMPAALILVIVVAPSLFSStIRGDWIGLVICLAIGCYLL 160 wine grape
XP_002313824  98 TLPSILFSLLRGDVGKWIAFVAVILRLFFPKRFPDW----LEMPGALILLIVVAPSLFAStIRNNWIGVAICLAIACYLL 173 black cottonwood
ACU13681      81 SLPSLIFDVFRGELGKWIAAVAVVLRLFLPRHFPDW----LELPGALILLIVVAPSLIAStFRDNIVGVVVCLIIACYLL 156 soybean
NP_001288966  83 SLPSVIFGLFRGDVGKWIAFVAVVVQLFFPKHFREW----FELPAALILLIVVAPGLIAGtFRDNWVGLVVCLLIGCYLL 158 field mustard
XP_004230845  81 SFPSLLFGLFRGDFGKWLSLIAVITRLFFPKHFPDW----LEAPAALVLLMVVSPSFLADtIRDNWIGTFICLVIGCYLL 156 tomato
EFH43241      85 TLPSVIFQFFSGDFGKWIALIAITIRLFFPKEFPDW----LEIPAGLILLIVVAPSLIAWtLRESWVGAVICLVIACYLF 160 Arabidopsis lyr...
XP_006369881 120 QAPPAVISWIKGEYGIWTAFLALLFRLFF--FIPGE----LELPFMALLLVIVAPYQVMN-IRGKQEGAIVGLVIAAYLA 192 black cottonwood
EDQ76847      88 QLPEVVFDFLRGGIGAWIAFAAVVIRLFFAQSFPNLihgdLELPVAFILLVVTAPKAIVH-FRGHFIGEIVCLVIGAYLL 166 Physcomitrella ...
ERN17647      85 SLPSVLFSFLRGEFGKWVAFIAIVLRLFFPRHFPDW----LEMPGSLLLLLVAAPSFFAHtLRDSVVGVVVCLIIAAYLL 160 Amborella trich...
Q93WS4       166 VQHISNAGGCRPAFAESRGVSHTIGIILL 194 Physcomitrella patens
XP_002284722 161 QEHIRASGGFRNSFTQRHGISNSIGLILL 189 wine grape
XP_002313824 174 QEHIRASGGFRNSFTKAHGISNTVGIILL 202 black cottonwood
ACU13681     157 QEHIRASGGFRNSFTKAHGISNSIGIILL 185 soybean
NP_001288966 159 QEHIRASGGFRNAFTKAHGISNTLGIIAL 187 field mustard
XP_004230845 157 QEHIRASGGFRNSFTKAHGISNTIGIILL 185 tomato
EFH43241     161 HEHIKASGGFKNSFTQKNGISNTIGIVAL 189 Arabidopsis lyrata subsp. lyrata
XP_006369881 193 FQHFSRIGNMQRAFEQGSVVA-TIAVVCV 220 black cottonwood
EDQ76847     167 YQHTNHAGGFRRAFAETRGVRHTVGILLL 195 Physcomitrella patens
ERN17647     161 QEHIRASGGFRNSFTQSHGISNTVGIIIL 189 Amborella trichopoda
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