Conserved Protein Domain Family
Serpulina_VSP

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pfam05540: Serpulina_VSP 
Serpulina hyodysenteriae variable surface protein
This family consists of several variable surface proteins from Serpulina hyodysenteriae.
Statistics
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PSSM-Id: 398920
Aligned: 9 rows
Threshold Bit Score: 440.347
Threshold Setting Gi: 300689375
Created: 20-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
CCY74940              3 KKHLMIILIIFTSQyfNLFGFYS-SSSFIDLLVHSNQVRIKMDALGFL----AGPENIRVAAGLTSANsf--sDLIFDNr 75  Brachysp...
CCY77352              6 KTYRLIIFMILISSqlYGFYGDGgGRSFIDFLMDMNQFRGRTDQVGVL----LGPSNYRFTVGFSGRTs----GIILDNw 77  Brachysp...
CCGMU:BP951000_0971   2 KKVLLTAIALLTIAstSVFGYYGaNSDWIDFLVDANQLRFRVRQMGFV----LGNDMIRGVVGVRDESet-sfGAIFDSt 76  Brachysp...
CCGMU:BP951000_2068   2 KKFLLTVTAVFVLAasSVFGMYGaDNTWLFFLIHGNQLRARMNQVGFT----LGNGTVKGTFGFKANTgl--tGQIF--- 72  Brachysp...
CCY74224              2 KKVFLTAITIAMLWgiKAFGMYGwSSLWIGFPTDPNQLRVRTDQLGFV----LGNGTIKGTFGFKANRgilgyGNIFEVn 77  Brachysp...
CCY74750              5 KKYFLTAIAILTMAsaQVFAMYGvDTDWIDFLTDGNQFRARLETLGFV----LGNDTIKGTFGFDNGAgg-tlGALVSQn 79  Brachysp...
WP_147557878          9 KRLIIIIFLILIPTslFGFYGDGsGRSFIDFLMDRYQLRARTDQIGVLygfgIGDGDFRFGLGFTGTTs----GIFFDNf 84  Brachysp...
WP_021957649          5 KKYLFAILLIFASQsfNLFGFYS-SSSFIDILVHSNQARARIDALGFL----AGPDNVRVAVGLTGANgf--gDLIFHNr 77  Brachysp...
WP_021959183          2 KRLHLIITIALISV--YSAFGYTiLEDFNDFLIDENQLTIRLDRAGVL----AGSENVRFMIGVEGETa----GVLLDN- 70  Brachysp...
CCY74940             76 ---ANYNGTKPLNRFIPSALLGIGYNSDLFGIGLGYEFTY---KNDAYMV----------HTPIITFTALSDSIRFNIPV 139 Brachysp...
CCY77352             78 t-nDYKGIPQLTVYLRPGITVGFGVKTANFNFGLGYQFRY---LHKDYQV----------HTPMFTFTALDNTLRFNLPI 143 Brachysp...
CCGMU:BP951000_0971  77 t-yAPNGTTKQFLNFIPTVSAGIGYTSDIFSIGVGYNYRY---HHTTFNGltkngyglseHTPVLTMTAMNDSLRIAIPV 152 Brachysp...
CCGMU:BP951000_2068  73 -------TTKGNKNLEATVSGGIGYTGDGFGVGVGYNYTYnnaAGGNVDA----------HTPVFVFNAVNNNLRVAVPV 135 Brachysp...
CCY74224             78 sssTSDQHNSESSFLNSTVSAGLAYTSDAISVGVGYNFTY---FDRFIQV----------HTPVLVLKVS-DKFRMAIPI 143 Brachysp...
CCY74750             80 -------SNPNWYDFVPHTSIGIGYTYSLISVGLGYTLSFgqkFSKYNGSanpktvvatgHTPVLVLNALDNAFRMAIPI 152 Brachysp...
WP_147557878         85 t-nDYSESEKLRIYFRPGVSLALGYKSDLISVGVGYQFKY---IDTNYMV----------HTPALMLTAMDNTLRFNIPV 150 Brachysp...
WP_021957649         78 ---NNYDDTNAFNQFIPSALIGVGYNSDLFGIGFGYEFTY---KSQAYMV----------HTPVITFTALSDSIRFNIPV 141 Brachysp...
WP_021959183         71 ---LDNGVKGGINIFKPRAIAGIGYKNDSFGIGFGYQFMY---STGTWQA----------HTPIITATALGEKLRVNIPI 134 Brachysp...
CCY74940            140 SIGLGYKskt--------------lptDLRKSRVISTSIEARYYFNDempaINHIRLYLNYGNAHI-------------P 192 Brachysp...
CCY77352            144 AIGVGSG--------------------NAKNTYIVSTGIETRYYPKTi---LDQIRLYIFYGYARIsyakygfkeenlqI 200 Brachysp...
CCGMU:BP951000_0971 153 QVAVKNGdia--------------nstDKVKYMGVSMDPQIRYY--TgieaFNEIRLYVKYGINQL-------------E 203 Brachysp...
CCGMU:BP951000_2068 136 SISSKADlnn-----------------gktDYFGLSIPAQIRYY--TgidaFNYIRFEFNYGQNSY-------------- 182 Brachysp...
CCY74224            144 RVAAGKRytanigtntseslvspqsatKTNDYLGVSIHSQFRIY--PgidlLRQIRLYVNYGMNKL-------------A 208 Brachysp...
CCY74750            153 QVVSINDkts---------------agIKQNLTAIKLNSEFRYY--TgmdiLTQIRLYLNYGYNSV-------------K 202 Brachysp...
WP_147557878        151 AIGVGKR--------------------TVRNTMIVSTAIEARYYLHKfmdyLTQLRVYFQYGYARIgwaqklydegmtdI 210 Brachysp...
WP_021957649        142 SVGVGYSska--------------lsvDLRKTIVISTGIEARYYFEEdipaINHIRLYVNYGNARI-------------P 194 Brachysp...
WP_021959183        135 TIGVGSGd-------------------INKDDLAVSTDIRIEYYFDSd--iFSRLRVNLQYGMYRMkanenrsvtaptlP 193 Brachysp...
CCY74940            193 NVKDTSQYMEQ--------------SSVGFQTRIYF-KVETP-----------DVLIFPILRVQYDQALTTKk--HNLGG 244 Brachysp...
CCY77352            201 DENAKNVYKAM--------------SSVGFDLRLYF-KIDKEsrkqlergkslSFSIEPYFRFLYNCALRTLe--NQGGR 263 Brachysp...
CCGMU:BP951000_0971 204 NTEVANSKEKA--------------ESFGFDFRAYF-GATVG-----------DVALKPFLKVTYDTALNA--------- 248 Brachysp...
CCGMU:BP951000_2068 183 --KEGTVNYSA--------------KNLSFQLRLHFlNTVIE-----------NVTVNPFLRVDFASALDA-----KGKT 230 Brachysp...
CCY74224            209 DNSDKNYSITR--------------QNFSFQLRIYQ-DYYVE-----------SVRLQPYLRIMFSTALNNNygkSFNGQ 262 Brachysp...
CCY74750            203 NGNAKSQY-----------------ETLGFDFRLYF-GATVE-----------EVELEPFIKIAYDTGLNK----NLPSA 249 Brachysp...
WP_147557878        211 DPNNKNIFKEQ--------------SSLTVDFRAYF-QFETEk----------GLSIEPYIRVLYGTALETVe--NQNGY 263 Brachysp...
WP_021957649        195 NVKDNSQYMEQ--------------SSVGFQTRIYF-KAETP-----------EVKIFPILRVQYDQSLPTKl--HNLSS 246 Brachysp...
WP_021959183        194 TNMAGTMKLEMgeggyygfvkdttaHSIGIDVRGYF-IAATD-----------PILIEPQIRLLYQGSVKDF---KGTSY 258 Brachysp...
CCY74940            245 DSFIPiYDNFN--VTAKGMDTYAPVMGAAGaasgaqgdpdlGSGLSGGYLASI--PE------NFYAIEPYRVNIALPVG 314 Brachysp...
CCY77352            264 HIRYG-GNNYD--INAYGFDATSLGVTFAS-----------VDKFAGGYISSF--PQipnpqgQNNITDIYRIGLAFPVG 327 Brachysp...
CCGMU:BP951000_0971 249 --KGKiAYSYN--TGAAATYGDTYGVKSSS--------------------ALVfvDDgt---gTGYEHNPWALNILPTLG 301 Brachysp...
CCGMU:BP951000_2068 231 AIVGTlGGSYT--SDIKAWTVAGAAEATAGq--------------------------------EAYDRNPYDLRILPSIS 276 Brachysp...
CCY74224            263 NSKYGtIGSYDglSASSGWNNADTASWISG---------------------------------SSSDRNPWFFNIAIPLG 309 Brachysp...
CCY74750            250 NLNFDvMEELK--ASDISSEFQYAGQSLYGt--------------------------------NSFDKTAWQLTLMPALG 295 Brachysp...
WP_147557878        264 LRRYP-GNNFN--ITAYGFSPGSLGIAPGE-----------QEELSGGYISST--PAipspqgLFAIGGIYRVGLALPLG 327 Brachysp...
WP_021957649        247 TSVFSiYDNFD--ITAKGLQPFTAAKGAGQsagaq-gdpnlASGLSGGYVASI--PE------GMYAIEPYRVNVAIPVG 315 Brachysp...
WP_021959183        259 SVTTPtGNTHNg-AVEFGHYIIDATSPMGAfdmdtstttgwYDMTTHRIKSEVegASidiggqTYYITKPQFIGVSVPVG 337 Brachysp...
CCY74940            315 FTATSSggLLHLYLEPSISYTII-NAKNMYTANDmleKRKTPFMALGYVLYGELYIRPVKSLELYLEMQAGGTSRfaEDM 393 Brachysp...
CCY77352            328 FRVQSE--YYGLYLEPSLSLTMI-DGKNISISGT---SKRGPFFTLGWCVYAEVYLTPIPELELYIELQTGGATRlgGAL 401 Brachysp...
CCGMU:BP951000_0971 302 MSANSD--IVSIYVEAGLGYGAVdTGYKFNAANAn----SGILHSMRWNAYGEIYINPVKDLQWYFEAEIGNGG------ 369 Brachysp...
CCGMU:BP951000_2068 277 LTVNTD--IVNFIFEPGIGYRVEdYGK----------QGGKLEHSVYWSAYGEVYVRPIPALEWYFEMDVNNGV---PKL 341 Brachysp...
CCY74224            310 IFANSD--ILSFYFMPELGLSITgNAD----------KSVKEKYALSYGIYAEIYMTPIKNVEWYNELGMNGAS------ 371 Brachysp...
CCY74750            296 LSASSD--IVSLYLEPSLGLEI--TGAQL--------NGEKDIYSFAWNVYGEISLTPIPNLEWYFEAELGDNA------ 357 Brachysp...
WP_147557878        328 LRASTD--LIGLYLEPSLSLTLI-SGKSISLMNM---NKKGPFITFGYVVYAELFITPIPDLELYLELQTGGATRwgNLD 401 Brachysp...
WP_021957649        316 LMATSQdgNIHLYLEPSISYTII-NAKGIYASSDmnsRRKTPFMSLGYVVYGELYIRPVKSLELYLEMQAGGTSRfaDDM 394 Brachysp...
WP_021959183        338 FTAESD--LISIYLEPALSLSMVtGGVNQYASSAkpvRIPPVFYSIGYLFYGELSITPLPNLEWYFEAQIGSATT--IDS 413 Brachysp...
CCY74940            394 KTINSDVK-LVFNGSTGIHYY 413 Brachyspira sp. CAG:700
CCY77352            402 DPAYADGTaLIFNTAAGITYY 422 Brachyspira sp. CAG:700
CCGMU:BP951000_0971 370 -GAFTKNT-LQFNGATGITWY 388 Brachyspira pilosicoli 95/1000
CCGMU:BP951000_2068 342 QDQSTTLP-IAFGANSGITWY 361 Brachyspira pilosicoli 95/1000
CCY74224            372 -DAAGITG-IKWEVSSGITWY 390 Brachyspira sp. CAG:700
CCY74750            358 --DETEKV-LNFNATTGITWY 375 Brachyspira sp. CAG:700
WP_147557878        402 AAYNTGTA-LVFNTSAGIAWY 421 Brachyspira aalborgi
WP_021957649        395 KTLNNDIK-LVFNGSTGIHYY 414 Brachyspira aalborgi
WP_021959183        414 LGNSSQGS-LAFNGSTGLTWK 433 Brachyspira aalborgi
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