2M5W


Conserved Protein Domain Family
La

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pfam05383: La 
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La domain
This presumed domain is found at the N-terminus of La RNA-binding proteins as well as other proteins. The function of this region is uncertain.
Statistics
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PSSM-Id: 398837
Aligned: 359 rows
Threshold Bit Score: 48.1713
Threshold Setting Gi: 74952420
Created: 20-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2M5W_A         9 ILKQVEYYFSDSNFPRDKFLRSEAAKNVDNYISIDVIASFNRMKTistdlqlITEALKK 67  Dictyostelium discoideum
XP_002011929  58 IRGQMEFYFGDANLSKDRFLRRYIEKDP--YVPLEIFLTFNKIKTltqdvqqISTSLSN 114 Drosophila mojavensis
EEC04964      17 IREQMEFYFSDANLRKDRFMGELVQENEEGYVDLEVFLTFHKIQGftndakvIATALES 75  black-legged tick
OWR52416      34 IMKQMEFYFSDANLSKDRFLGDLVKNDP--YVPITEFLKFNKIRSmtqdvgdIVKAMKH 90  Danaus plexippus plexippus
XP_011051661  52 ILKQMEFYFSDANLNKDRYLSGLLKENP--YVDLEVFTRFNKLRElttdinrIAKALQG 108 Panamanian leafcutter ant
XP_019701049  54 ILKQMEFYFSDANLSKDRYLSELLKKSP--YVALDVFTNFNKLSTlttdtnrIAKALEK 110 Jerdon's jumping ant
EFA00619      31 ILQQMEFYFSDSNLTKDRFLSQLIKENP--FVDLNVFLKFNKITKlttsiddIQKAVQK 87  red flour beetle
XP_002432679  31 iRERMEFYFSDSNLQKDRFLSQLIKDDP--EVDLEIFLKFNKIHQlttslhdLKKALKK 87  human body louse
KJE97123      14 trQQLEFYYSDANLARNGFLMQRIRESPDGYVPVATIASFNKLVAlgadeslIFAAAQA 72  Capsaspora owczarzaki ATCC 30864
XP_016839463  61 ILKQMEFYFGDSNLSKDRFLSELIKECP--DVPLDTFIKFNKIRSlttdigrIAKALSK 117 jewel wasp
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