1EYS,2WX5


Conserved Protein Domain Family
PRC

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pfam05239: PRC 
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PRC-barrel domain
The PRC-barrel is an all beta barrel domain found in photosystem reaction centre subunit H of the purple bacteria and RNA metabolism proteins of the RimM group. PRC-barrels are approximately 80 residues long, and found widely represented in bacteria, archaea and plants. This domain is also present at the carboxyl terminus of the pan-bacterial protein RimM, which is involved in ribosomal maturation and processing of 16S rRNA. A family of small proteins conserved in all known euryarchaea are composed entirely of a single stand-alone copy of the domain.
Statistics
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PSSM-Id: 398765
Aligned: 114 rows
Threshold Bit Score: 28.0243
Threshold Setting Gi: 3914651
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1EYS_H 143 SIAEGDPDPRGMTVVGLD-GEVAGTVSDVWVDRS-EPQIRYLEVEVAan-------------kKKVLLPIGfSRFDKKAR 207 Thermochromatium tepidum
O26906   8 GVQMKVTEFLGLKVLDKN-AMEIGKVSDLEVDPE-EGLIKSLIISKGels----------lkqRTFIVDME--SVSRVGD 73  Methanothermobacter t...
Q9AK83   6 RTDIDPRNLIGRKAFDRD-GSRIGTVDEVYLDDA-TGVPEWAAIRTGlf-------------sRDAFVPLE--PSELVDG 68  Streptomyces coelicolor
Q9RJP4  15 FEAENIRDWRGLDVVDYD-GRKIGTLESIYFDTL-TDRPAFATVTIGlpt-----------rrRLVFVPVD--KATVGPS 79  Streptomyces coelicolor
Q8XJH4   1 M--YRIRDLIGLKVFDSN-GKKVGVVCDLAIDYF-NGKVMGFIITKKlf-------------sKRDYVDLT--NVISLSD 61  Clostridium perfringens
Q9X7S4  87 HQQNLRARLRGARVLTEA-GTEIGTVLDVVVEGGtGGRVVGFRVAASrrfvpg-----ptrhrRRVYVPRG--RTLTVSG 158 Streptomyces coelicolor
Q9KDE9   1 MRTF--ASLEGLPVIDRQtGNELGSVMDGIIA---PDRMMGFLVNKNgw------------fhRHQWLPLD-HIISLGTD 62  Bacillus halodurans
Q9X7S4   2 DELMAARSLTTRPVVTLG-GDAVAHVKDTVCDAA-AERITGFTLTGRgll----------sgpLKEGLPWS-AVYALGHD 68  Streptomyces coelicolor
Q9RVX7   1 M--IKGKELLGRPVVAVSnGAQVDNVHDVVFDHQ-GNRVLALLVEEGgw------------lrAAKAVPFG-RVQSIGEK 64  Deinococcus radiodurans
Q8TV79   1 MRIL--RDLIGKPVIDSS-AKHIGEVLDVEFDEE-SGEVTTLIVGHSkrpgvlrkikwlggeeKAVRIPYS--NVVAIED 74  Methanopyrus kandleri
1EYS_H 208 KVKVDAIKAAH 218 Thermochromatium tepidum
O26906  74 YVVLAIAADEA 84  Methanothermobacter thermautotrophicus str. Delta H
Q9AK83  69 ALRVPFDRALI 79  Streptomyces coelicolor
Q9RJP4  80 YLKVTYDKSLV 90  Streptomyces coelicolor
Q8XJH4  62 TIMTEGVHVHR 72  Clostridium perfringens
Q9X7S4 159 RALVLPDGAVR 169 Streptomyces coelicolor
Q9KDE9  63 GVMIEAKGLSK 73  Bacillus halodurans
Q9X7S4  69 AVMIRDRRGLV 79  Streptomyces coelicolor
Q9RVX7  65 AVMIATPEDVV 75  Deinococcus radiodurans
Q8TV79  75 MVLVEGRWVSR 85  Methanopyrus kandleri
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