Conserved Protein Domain Family
Nsp1_C

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pfam05064: Nsp1_C 
Nsp1-like C-terminal region
This family probably forms a coiled-coil. This important region of Nsp1 is involved in binding Nup82.
Statistics
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PSSM-Id: 398645
Aligned: 19 rows
Threshold Bit Score: 141.313
Threshold Setting Gi: 253683475
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q5B4N1       389 LGASTAG-PPppaqsrLKNKTMDEIITRWATDLTKYQKEFREQAEKVAEWDRMIVENGSRVQKLYGSTVDAERATQEIER 467 Aspergillus nid...
Q6FPU8       663 LESKPVE-VKpv---sLDNKTLDDLVTKWTNQLSSASKHFDQYSKRITDWDRILVDGGKQISQLYTEAVNAEQAQNKIDQ 738 [Candida] glabrata
Q2HEA0       394 LSASTMG-PAsql-prLKNKTMDEIITRWATDLSKYQKEFKDQASKVAEWDRMLVENGEKIQKLYTSTYEAERANAEIDR 471 Chaetomium glob...
Q7SEK6       442 LASTTTG-PTstl-prLKNKTMDEIITRWATDLSKYQKEFKSQAAKVAEWDRLLVENGEKIQKLYTSTYEAEKASNEIER 519 Neurospora crassa
Q0U9D0       462 LANSTAG-PPpsaqsrLKNKSMDEIITRWAADLSKYQKEFQTQAETVAKWDRALVENSDKVRQLYSKTFQAERDAAEVER 540 Parastagonospor...
Q7QH06       207 TNTQTTQsAAvaanqqLKFFQLEEFINKWTLELEEQEKLFTNQATQVNAWDNMLLANGEKIVALNEAVMKVKAEQNAMEQ 286 Anopheles gambi...
NP_001075137  65 PSTMTVNsIVtp---vMTYGPLESMANNWHYQLQEQEKHYFYQANQFNLWNQALIESGNEIALLYNEVERVKIDQSRLEQ 141 house mouse
EHH61123      57 lvpytST-VSvvatpvMTYGHLEGLINEWNLELEDQEKYFLLQATQVNAWDRTLIENGEMISILHGEVNKVKLDQKRLEQ 135 crab-eating mac...
XP_001629560 283 ASAVPT--ALtstapqLTYKQLEDHINKWALELEDYERTFLDQAAQVNAWDRLLMENGEKITELNSGVESVKAEQKRLDE 360 starlet sea ane...
CAY05447     478 AVATPSL---------LRGKSMDEILNRWSVSLDSSIKEFSRQAAEVAAWDKVLLKGGDEISALVSALGAAEEKQAGIER 548 Ustilago maydis...
Q5B4N1       468 QLASVEGQQDELSSWLDRYEREVDEMM-SKQVGPGEslq--gpDQE 510 Aspergillus nidulans
Q6FPU8       739 SLQYIERQQEELETFLDNYESRTEALL-SDILPSNS-------GVP 776 [Candida] glabrata
Q2HEA0       472 QLSNVESQQDELGAWLDRYEADLNELF-AKGPGAGGavseqaaGPD 516 Chaetomium globosum CBS 148.51
Q7SEK6       520 QLSGVESQQDELTAWLDQYEAQLEELF-KKQQLGSG-------GES 557 Neurospora crassa
Q0U9D0       541 QLTMMEENQQELDSYLDRYEKEIENLMkMHGVSGKS-------DGL 579 Parastagonospora nodorum SN15
Q7QH06       287 ELEFITAQHTELEECIVPLEQELSRIG-------QI-------DLE 318 Anopheles gambiae str. PEST
NP_001075137 142 ELDIILFQQKELEQMLTPIEELLKEQN-GPLNMMYV-------NKE 179 house mouse
EHH61123     136 ELDFILSEQQELEFLLTYLEEATSNQS-GLHYLQDA-------DEE 173 crab-eating macaque
XP_001629560 361 ELNFISAQQRELEDLLKPLEDELKKNSvGTSQLQHA-------DRE 399 starlet sea anemone
CAY05447     549 TLDYLESSQSDLTSLVTDYEAQIESLL-PGLTSQINlt---saDVE 590 Ustilago maydis 521
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