2OB5,1OGF,3P12


Conserved Protein Domain Family
RbsD_FucU

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pfam05025: RbsD_FucU 
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RbsD / FucU transport protein family
The Escherichia coli high-affinity ribose-transport system consists of six proteins encoded by the rbs operon (rbsD, rbsA, rbsC, rbsB, rbsK and rbsR). Of the six components, RbsD is the only one whose function is unknown although it is thought that it somehow plays a critical role in PtsG-mediated ribose transport. This family also includes FucU a protein from the fucose biosynthesis operon that is presumably also involved in fucose transport by similarity to RbsD.
Statistics
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PSSM-Id: 398618
Aligned: 265 rows
Threshold Bit Score: 74.756
Threshold Setting Gi: 122420818
Created: 20-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2OB5_A           7 KNIDPALNADVLHALRAXGHGDTLVISDTNFPSDSVar-qTTVGK-VLHIDNVSAARAXKAILSVLPLDtplqpSVgrxe 84  Agrobacterium...
BAM03790         1 MLKTSLTHPEILGVLGRAGHLARVLITDGNYPHSTRrnpaASTVWaNFRPGLLGGATALELVCDAVPVE-----AVavme 75  Phycisphaera ...
WP_013109908     1 MLKSKLIHPDILAVLGRAGHHARILIADGNYPASTTmgpnGTLISlNLSPGLVTVNQVLEAILSAIPID-----HVhtmg 75  Planctopirus ...
jgi:Plabr_1982   1 MLKHQLIHPEINAIIGRAGHHSKILIADGNYPASSTlgpnAELVSlNLAPGLVTVSQVLETLLTAIPID-----VVntmg 75  Rubinisphaera...
Q7UUK8           1 MLLSNLIHPEISAVCAAAGHHSTILIADGNYPALNKrgpnAKLVSlNLSPGLVSCDQVLKALLSAIPVE-----AAmtmq 75  Pirellula sp.
jgi:Psta_0938    1 MLRSTLIHPEISRVLAAAGHHAKILIADGHYPASSKkgpnATVVSmNLMPGLITCDQALQAVLSAVPID-----EIntmn 75  Pirellula sta...
WP_012635901     1 MVKGGLIHPHILESVAAAGHGAQILITDGNYPASTKtkedVNKVYlNLAPGLVNVTDVLKVLVEVINIE-----EAtvma 75  Halothermothr...
WP_021845820     1 MLKGKLIHPELIHQLALCGHGSKILIADGNYPLEEKs--sGVKIFlGLGPGVPSVIEVLAAIHSVCEIE-----KAqvmv 73  Blautia hydro...
WP_013778853     1 MLKTSCINPEIMSTLACCGHGDKILIADGNYPIESNtntnTKKAYiNLSHGIPTVTQVLNVLSNTITIE-----KAevma 75  Tepidanaeroba...
Q896U5           1 MLKIKCLNPQLIRALAHCGHGDKILICDGNYPIDSCtsetTEKVYlQLTHGIPMVTDVLKVLVESINIE-----RAqvmt 75  Clostridium t...
2OB5_A          85 vXGAPdq----lEPVQVEVQQEIDAAEGksapXYGIERFAFYEKAKq---AYCVITTGETRFYGCFLLTKGVI 150 Agrobacterium fabrum...
BAM03790        76 pEREGayamtgdPPVWAHYRRVLAERAGftggFDALQKPAFNREAMse-dLCLVIATGEQALFANILLTIGVV 147 Phycisphaera mikuren...
WP_013109908    76 iPADDpyaqlgdPPVWKEFSATMAA-AGlsipLTPISKWDFYEEVKst-dHVLTIQTGDVALWANLLLKVGVR 146 Planctopirus limnophila
jgi:Plabr_1982  76 iPADDpyagqgdPPVWAEYRQILKD-AGseveLEPIQKWDFYEAVAsr-dLVLTIQTGDQALWANLLLSIGVR 146 Rubinisphaera brasil...
Q7UUK8          76 tEADGpyaldgdPPVWEEYRKSFKE-AGskveLQPLEKWSFYDHVItd-dHVLTIQTGDQQRYANLLLTLGVR 146 Pirellula sp.
jgi:Psta_0938   76 yPKDDpytldsdPPVWNEYRQTLAK-LGmnleLKPIDKWDFYDAVAta-dHVLTIQTADTQRFANLLLSIGVR 146 Pirellula staleyi DS...
WP_012635901    76 pSKGDk------PAIFKEFKRILSSgt----dFNEIGRFEFYDKCVsnqdLCLVIVTGEQRIYANILLTIGVV 138 Halothermothrix orenii
WP_021845820    74 pEDDRe------PEIFGEFRRELPDl-----eLEELARYDFYAACMeegvLKLAVSTGEQRTFANILLTVGCV 135 Blautia hydrogenotro...
WP_013778853    76 tDDGQe------PLIFQEFKKILGTea----tLYDLNRFKFYEECKke-nVKLAIATGEQRVYANILLTVGVV 137 Tepidanaerobacter ac...
Q896U5          76 pGEGEe------PTIFNEFREILSNei----qLDELGRFEFYDESKen-nIRLAIATGEKRIFANILLTVGVV 137 Clostridium tetani
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