3ONL


Conserved Protein Domain Family
V-SNARE

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pfam05008: V-SNARE 
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Vesicle transport v-SNARE protein N-terminus
V-SNARE proteins are required for protein traffic between eukaryotic organelles. The v-SNAREs on transport vesicles interact with t-SNAREs on target membranes in order to facilitate this. This domain is the N-terminal half of the V-Snare proteins.
Statistics
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PSSM-Id: 398604
Aligned: 76 rows
Threshold Bit Score: 42.2005
Threshold Setting Gi: 121982071
Created: 20-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3ONL_C        10 FKTTLEQAKASLAEAP--SQPL-S--QRNTTLKHVEQQQDELFDLLDQMDVEVNNSigdaSERATYKAKLREWKKTIQSd 84  baker's yeast
EDQ85137      13 LQAEIDKLRRLQSQ-I--SNYSgE--QRRQAVQEAQSHLDECEDLLYDMSAEVQNAp--pSLRQRMNAKVTDYKRQVAN- 84  Monosiga brevic...
Q7SY45        13 YKSLYDEVKLMPERVQ--KSQG-E--ERKRIVRDFDERVSEAEEVLQGMEQELFGAp--sSFRTPMSTKIRLYRRDLAK- 84  zebrafish
Q2KIU0        18 FRGLHEDLRGVPERLL--GMAGtE--EKKKLIRDFDEKQQEANETLAEMEEELRYAp--lSFRNPMMSKLRTYRKDLAK- 90  cattle
Q0V9D5        13 YKELYTKLQKIQERLQ--SCYG-E--EKKKLLREFSEKQKEANEMLSEMEYELKSAp--pTFRHQAAGQLRAYKRDLVK- 84  tropical clawed...
XP_001300185  10 LDSHKDVIEQKIERLK--SA---DpgSRNSLISEINQDLDNFRNEIKQLSNRLKTAp--qSDKQFYSEDLSNFQNAENK- 81  Trichomonas vag...
EAX92456      15 AEGLLDQIKSDMGRLD--GQPL-D--KRRALDAEIERKISSLENLLNKMTADLRSVtq-qSSKSFYEGEIKNYRAEHSK- 87  Trichomonas vag...
EAY12059      11 IDRIKKDISNAVSNLP--QYSA-Q--ERPSKMQKIEARFGEFDAAINELDLQALmf--dvNDKNAAKKYLVEVRNEYKK- 82  Trichomonas vag...
EAY10989      13 CTELEKDIGEAISRIP--ET---EqgQRRKLVREIEEKIKALIQDRDFMDCEINEMqp-gEERDSYQEKLEYHNECIKQ- 85  Trichomonas vag...
Q57YW6        24 ASRLQESLQRSGVSYQapPAAGp--qSRSQQCHSLQQSLTRLRELITNMSYESNEVep-aSAKEEVKRRLEDYRGKLVA- 99  Trypanosoma brucei
3ONL_C        85 IKRPLQ 90  baker's yeast
EDQ85137      85 FKKTIT 90  Monosiga brevicollis MX1
Q7SY45        85 LQRDIR 90  zebrafish
Q2KIU0        91 LHREVR 96  cattle
Q0V9D5        85 LQMEAn 90  tropical clawed frog
XP_001300185  82 FSQEIK 87  Trichomonas vaginalis G3
EAX92456      88 VIEELR 93  Trichomonas vaginalis G3
EAY12059      83 LQNEYT 88  Trichomonas vaginalis G3
EAY10989      86 LQDQLV 91  Trichomonas vaginalis G3
Q57YW6       100 LEKQLS 105 Trypanosoma brucei
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