2XCM


Conserved Protein Domain Family
CHORD

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pfam04968: CHORD 
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CHORD
CHORD represents a Zn binding domain. Silencing of the C. elegans CHORD-containing gene results in semisterility and embryo lethality, suggesting an essential function of the wild-type gene in nematode development.
Statistics
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PSSM-Id: 398569
Aligned: 175 rows
Threshold Bit Score: 81.8129
Threshold Setting Gi: 0
Created: 20-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2XCM_E         10 QVCKNKGCGQ----TFKERDNHETa-CSHHPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPPCTKGWH 71  thale cress
XP_011610005  159 TACKNGGCTK----SFDGPSSNSDv-CSYHPGVPIFHEGMKYWSCCKRKTSDFNTFLSQEGCIKGTH 220 torafugu
XP_005996302  155 TSCKNKGCRK----TFVGPESDEEv-CLYHPGDAVFHEGMKYWICCKKKTSDFNTFLAQEGCARGTH 216 coelacanth
Q7T3F7        153 TSCKNGGCCK----TFAGQASDDEt-CLYHAGVPIFHEGMKYWSCCKRKTSDFNTFLSQEGCTRGKH 214 zebrafish
Q4QRD9        157 TACKNGGCMK----TYNGPKTDEEm-CLYHSGVPIFHEGMKYWSCCKRKTSDFNTFLSQEGCNKGSH 218 zebrafish
34_pfamImport   1 TSCKNAGCVQvwygVMA-----IAviVNLWNGCQRWHAEMKYWSCCKRKTSDFNTFLAQEGCTTGKH 62 
XP_016848181  154 TTCKNAGCAK----TFEGPHSMEEt-CTYHMGVPIFHEGMKYWSCCKRKTSDFNTFLSQEGCSTGTH 215 green anole
XP_797726     192 TICKNKGCRM----PYEGEMSLTEr-CKHHPGAAIFHEGMKYWSCCNRKTSDFNNFLNQEGCTTGSH 253 purple sea urchin
XP_015782482  161 TSCKNNGCKK----SYEGPHSNQEe-CLFHPGTPIFHEGMKYWSCCRKKTSDFETFLSQEGCESSSH 222 two-spotted spider mite
XP_002409601  152 TSCKNAGCQQ----SYQGEQSNLEi-CLYHSGFPIFHEGMKYWTCCQRKTSDFANFLEQRGCTSGSH 213 black-legged tick
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