2IA7,5IW9,6OD1


Conserved Protein Domain Family
GPW_gp25

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pfam04965: GPW_gp25 
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Gene 25-like lysozyme
This family includes the phage protein Gene 25 from T4 which is a structural component of the outer wedge of the baseplate that has acidic lysozyme activity. The family also includes relatives from bacteria that are also presumably lysozymes.
Statistics
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PSSM-Id: 398568
Aligned: 231 rows
Threshold Bit Score: 42.5639
Threshold Setting Gi: 488138478
Created: 20-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2IA7_A                  28 SSAEEDIAESIRIILGTARGERVXRPDFGCGIHDRVFSVI--NttTLGLIENEVKEALILWEPRIELLSVTAspr----- 100 Geoba...
WP_014218865            24 CSLKQSVGHHLHLIITTAFGEMQSDVDFGNSIWDHDFDNLtaRtrQQEWMKESLLQAIRKHEKRLDAIKVDVlvkqeevn 103 Niast...
PRJNA61269:NIASO_11780  24 CSLKDSIAHHLHLMLTTSFGELMSDEQFGNKLWEEDFDNVsyRsrQKEKIILSVGRTIAKFEKRLEKVKIEMyvhqeesp 103 Niabe...
jgi:Cpin_2306           24 CNLEDSVAQHIQLLITTVLGENKDDPQYGCRIWDFDFDIRasNneVKEQVELSVKSAIVRYEQRITQVRVSAmvsqeeln 103 Chiti...
Q5LDU2                  26 CSELESIDQHIELLLTTCPGEHRFDPKYGCRIWELDFERIvsTeqWKELFTGYVMQAISTYEKRISDITLSVnlqevvre 105 Bacte...
CAZ94479                24 iGMRDSISQFISVIITTYFEEYTFDEAFGSEIWETDFDLLinAnvLKERIKKSLKNQIETYEKRLSNIDLNVelmeslss 103 Zobel...
WP_014396956            20 RDSLEHVMRNIEAVLNTKKGYGFFMHDFGLGGYTEKLGTRe----LVEALTAEIQQEVTQHEPRLVEPEVKLrgr----- 90  Coral...
Q9KN56                  35 wdVLESIKRNVSNILNTRIGGAQSAPHLGLVDFNDATLET--Ld-LSVRIKLAIQQCLERYEPRLTRVLVRAdqd----- 106 Vibri...
WP_013868295            35 wdVLQSIKRNVSNILNTRMGEAQSAPTLGLVDFNDATLET--Ld-LSLRIKLAIQSCLDVYEPRLRNIVIRSesd----- 106 Vibrio
Q88JM7                  25 SHKFAAIKRHLETLLNARQGCSQSSPELGLRDFNGHDVSN--Gd-LLVQVSADIRRTLQRFEPRIQVRTLNAvpd----- 96  Pseud...
2IA7_A                 101 -----eaaEGRLLIDIEYRVRSTNT 120 Geobacter sulfurreducens
WP_014218865           104 alsterrvKKRLDINISARLTATSe 128 Niastella koreensis
PRJNA61269:NIASO_11780 104 sgtadprmKRKLEFVITAVISATNE 128 Niabella soli DSM 19437
jgi:Cpin_2306          104 -gisakkvKKKIRVTITGTLARNKT 127 Chitinophaga pinensis DSM 2588
Q5LDU2                 106 evldnrmiRKRVDITVLATLNSTga 130 Bacteroides fragilis NCTC 9343
CAZ94479               104 -ntnkvrlKKYLYITIKGTIIKTDE 127 Zobellia galactanivorans
WP_014396956            91 ------dssLWLYFDCKGTFDGQPc 109 Corallococcus coralloides
Q9KN56                 107 -----sfnPLTLRFHITATINSEAL 126 Vibrio cholerae
WP_013868295           107 -----vfsPLMLRFHIVAEINSDAL 126 Vibrio
Q88JM7                  97 -----thaPLELHFRLDCLVQVNNH 116 Pseudomonas putida KT2440
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