Conserved Protein Domain Family
TrbC

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pfam04956: TrbC 
TrbC/VIRB2 family
Conjugal transfer protein, TrbC has been identified as a subunit of the pilus precursor in bacteria. The protein undergoes three processing steps before gaining its mature cyclic structure. This family also contains several VIRB2 type IV secretion proteins. The virB2 gene encodes a putative type IV secretion system and is known to be a pathogenicity factor in Bartonella species.
Statistics
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PSSM-Id: 398559
Aligned: 107 rows
Threshold Bit Score: 37.5848
Threshold Setting Gi: 122544965
Created: 20-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_011205831         29 FLiaalavlaiagigavtgwaispsatpgSIDVPQVLASTFSDQVPGseggglgggLPFTSAVGAFTDFMAGpAIFTLGI 108 Proteoba...
Q5X071                1 MSqlkrwsq--------------slanlyLIAVCTLLPTLSHA-------------QSIESIINRTINYLQGgLARTVGV 53  Legionel...
Q7MRR3               22 IStpspisstalp------thqnkgkqmkQIVWLWLLSLPLLAASGDp-------gAKFAEIVERVYDMIQNgVVAGVAS 88  Wolinell...
jgi:Rsph17025_4378    1 MPfpmakrh-------------gffvilaSVVMATVMAEPAAA-------------AGFTDFLNNIVDEFDA-AKQPVAL 53  Rhodobac...
Q7X110                7 IEkdtaggprkgdk----vdkalgltanaLVMALVFLPQLAYAQDAGgt------fGGITAFLKSITQLLIYeWGYYIGI 76  Xanthomo...
Q8VME7               38 QKtpshkammrddw----makatkfavlgSFISFAILPEIANAAMDF---------SGLKNLAKDVVSFLIFdIGYYLGI 104 Pseudomo...
Q7X3L8               39 QKkashaslmrkdw----taraektlligSLISISLLPEVANAALNF---------SSLTNLAKDIVSFLIFdIGYYLGI 105 Pseudomo...
SDU_Lin:LFML04_1423   1 MQ---------------------------SEKVTLFIQNYGEN-------------SLITTFANNIANFVVYgLGGFLFI 40  Leptospi...
Q8KJL4               12 KTrvpspfsmlrt------taeyvpaaaaGAAWTVFSIGPASAQVTGg--------TDPAKMVQNICTFILGpFGQSLAV 77  Mesorhiz...
jgi:Acry_3521         9 RDrvanfaagtvsk----idrgawiqpavLVTVGFLLPAVAHAQVVSg-------gTSPTTIIDNIATFILGpFGEGVAV 77  Acidiphi...
WP_011205831        109 LGIVVAGAVLVFGG-EfsgfVRSVCMMVIAVSMIFVSSNLVKGI 151 Proteobacteria
Q5X071               54 FCIIIAGYLCLARQkFp---KEYFVMILVGMGIIFGGSSLYSTL 94  Legionella pneumophila str. Lens
Q7MRR3               89 LVIIIMGFMLMFKMfEq--fKWWFVGIIGGIALLYGGTFIVNAI 130 Wolinella succinogenes
jgi:Rsph17025_4378   54 IALMLIGAGWLFNFvD----LRRAGWAVAGVVLLYASTEVLSMI 93  Rhodobacter sphaeroides ATCC 17025
Q7X110               77 ITLAIQGYRWKSGRiD----LMTLGGWGLGIGLVFFAPNIVSDL 116 Xanthomonas citri pv. citri
Q8VME7              105 AAIAFCGFQAKSGRmS----WGQFGWAVAGVFLVFFSPNLVDTI 144 Pseudomonas putida
Q7X3L8              106 LAIVITGYKAKSGHiS----WGAFGWAVAGIFLVFFAPNIVTEI 145 Pseudomonas putida
SDU_Lin:LFML04_1423  41 LGMARAGFAMKSHDaDg---IRQGVMTIAGGSLVLMSKAIWDTL 81  Leptospirillum ferriphilum ML-04
Q8KJL4               78 LGLVAIGISWMFGRaS----LGLVAGVVGGIVIMFGASFLGKAL 117 Mesorhizobium loti
jgi:Acry_3521        78 LAVAAVGFMCWTGRmG----FHAIGWLAAGLVLVFGSSYLVTTF 117 Acidiphilium cryptum JF-5
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