Conserved Protein Domain Family
SHQ1

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pfam04925: SHQ1 
SHQ1 protein
S. cerevisiae SHQ1 protein is required for SnoRNAs of the box H/ACA Quantitative accumulation (unpublished).
Statistics
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PSSM-Id: 398539
Aligned: 63 rows
Threshold Bit Score: 153.04
Threshold Setting Gi: 122117100
Created: 20-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
CCK70458     260 ATMPIEFSDKEKEQMQkNL-PHKSYSllsSe--TTKLSYITILNILFSYSFDLLENEGDQTSE-SIWTVGKLTPQIAYLD 335 Kazachstania na...
3_pfamImport   1 -STDLSITDADREKLK-DLrTKRSHSi-----qSDSSIAISLVDIIFAYCYDQRVNGWETTCE-SGWSCAKLSPSLSYFS 72 
XP_002634912 430 fsLPLDLTDEDRVRLK-DLrKTKIQK---Iw-aSDLEIATSLVDILYAYCYDQRVNQWETNCE-SGWTCSKLSPSLSYFV 503 Caenorhabditis ...
EGT48652     224 FSSKLEITDDDRVKLK-DLrKSKTPK---Iw-aTDVEIATSLVDLLFSYCYDQRVNDWEATCE-SGWTCSKLSPTMSYFL 297 Caenorhabditis ...
Q9TYM6       223 FAQKLEISDEDRTKLK-DLkKSKTSA---KingNDVEIMTSLIDIVFGYCYDQRVNDWESACE-SGWNCAKLSPSLSFFA 297 Caenorhabditis ...
EFN77936     238 QKDQIMFNEVEVDLLK-EL-PNKEYL---LeaeDIQKLCLNLVDILYANCYNRRTTLGENTVE-SGWTINKLSSTLCWFQ 311 Jerdon's jumpin...
EEZ98184     200 KSDDVQFSDQELDFLK-DL-PNKTYN---LsetQVNYCHCCLVDILYAYCYDRRTTQFEGTSE-SGWTIVKLAATFCWLD 273 red flour beetle
XP_004922077 177 FKNEVEFTDEEVAILK-EL-PNKHYL---LskeEYREIMLGLIDILFGYCYDKRTTLNESTVE-SSWTINKLSSTLSWFC 250 domestic silkworm
EEB18058     196 KPMKKELSDDLKEIIN-SFtPKNEFK---LtenDKKIINYQIVDILFAYAYDYRTTEGDKSVE-SGWTINKLSSTLSWLE 270 human body louse
Q16T55        47 lpanvclnnDQQSRIRmIVdEKKREVekyRtlsKNVSACFNLVDIVLAVLYDKIVNSNELNEAiSHVNIHRISSSLSYFE 126 yellow fever mo...
CCK70458     336 QqlvpeepplqenvlikeathssnnpatkQeSIIQSSIRAGFRRSLCYPLHRVFDLSERAWRHAYHILSG--GKRLVIKV 413 Kazachstania na...
3_pfamImport  73 L----------------------------F-NSIRQALICSVHRAITYSLYRSFELAIKVVEDVKEVFRR--GRSAILHI 121
XP_002634912 504 K----------------------------F-GSVKACLISSIRRSLTYPLYRNFSLSSQIINDVCHVIKS--DRTALLHI 552 Caenorhabditis ...
EGT48652     298 K----------------------------F-DSVKECLLSSIRRSLTYPLYRSFDLSQSVIKDVCHVITV--GRTALLHI 346 Caenorhabditis ...
Q9TYM6       298 K----------------------------F-SSVKECLLACTRRALTYPLYRSFQLTQRVIQDVCHVITAggGRPALLHI 348 Caenorhabditis ...
EFN77936     312 N----------------------------F-TSMDEVIIACFRRSLCYPLYRNWELSMKVFEDVKKVVKL--GKKYIIKC 360 Jerdon's jumpin...
EEZ98184     274 V----------------------------F-QTPKDALVSAFRRSVIYPLYRNFELNRTVLTDLRKLLDL--GEKYIIKC 322 red flour beetle
XP_004922077 251 T----------------------------F-LDTRHVLIACYRRALTYPIFRNYELCNKVKNDLVSLLRK--GKKLVIKC 299 domestic silkworm
EEB18058     271 V----------------------------F-DSLKSVLVASYRRSLIYPLYRNWNLAELIHEDVVKILEN--GSMEVTKC 319 human body louse
Q16T55       127 E----------------------------F-SSYEDVLIAFYRRSCMYPLYRSKDLARKSVKLFIDAMNGenAVEWVLEK 177 yellow fever mo...
CCK70458     414 LLAVHELFRYH-D-VYYVYNKCLLDDLCSWFI-DQGnETVIRSLALEVHKELsqVSKST 469 Kazachstania naganishii CBS 8797
3_pfamImport 122 FCDIHRIFVESgD-FRYILNDLFITDYILWIQ-AVP-DAIIAEVQEKLAEIGe-IKKSD 176
XP_002634912 553 LCDIHRIFIESgE-FRYILNDLFITDYIFWIQ-SVP-EDVLKTILKEMETEG--IQKED 606 Caenorhabditis briggsae
EGT48652     347 LCDIHRIFIDSgE-FRYILNDLFITDYIFWIQ-SVP-DDVLKKIGTDLNEIS--IEKID 400 Caenorhabditis brenneri
Q9TYM6       349 LCDLHRIFIESgE-FRYILNDLMIADYIFWIQ-TVP-DEILTRIQTDLTEISgkIDKYD 404 Caenorhabditis elegans
EFN77936     361 FCEIHSIFNTSyA-PRYILNQLYIKDFLIWLQ-KCP-DSLIESLQTILDNVYpdkvnme 416 Jerdon's jumping ant
EEZ98184     323 LIEMYHIFLTG-DcCRYILNNLFIKDYIIYIM-KWD-RTKWREVVEEIKQVT--IEKSD 376 red flour beetle
XP_004922077 300 MIEVHQMFNTSnD-ARYILNQLYIKDYLVFLQ-KCR-NEEIMEICNNIANIE--LCKKD 353 domestic silkworm
EEB18058     320 LLEIKEIFDES-E-NRYILNNLYINDL-SWFSyLNE-NDYFIQLSREVKKVK--VTKYE 372 human body louse
Q16T55       178 LLFSYEAFKNN-D--CVVLNHYYIKDCIRFLQlCKP-IEMLQEAGRYCAKILlsVHSKS 232 yellow fever mosquito
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