Conserved Protein Domain Family
Plant_tran

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pfam04827: Plant_tran 
Plant transposon protein
This family contains plant transposases which are putative members of the PIF / Ping-Pong family.
Statistics
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PSSM-Id: 203098
Aligned: 5 rows
Threshold Bit Score: 321.933
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q9AY56 171 SRYL-RRPTAEDLERLLQVGESRGFPGMLGSIDCMHWRWKNCPTAWKGQYTRGDQKyPTIILEAVASYDLHIWHAFFGIP 249 rice
Q9LDY0 162 DEYL-RAPTATNLRRLLNIGKIRGFPGMIGSLDCMHWEWKNCPTAWKGQYTRGSGK-PTIVLEAIASQDLWIWHVFFGPP 239 thale cress
Q9SH78   1 MSYLsQAPLYSSIPR------------------------KNCPIAWEGQFTRGDKGtSTISFEAVASHDLWIWHTFFGCA 56  thale cress
Q9FYM5  89 CRYL-RSPDANDVARLLHIGESRGFPRMLGSLDCMHWKWKNCPTAWGGQYA-GRSRsPTIILEAVADYDLWIWHAYFGLP 166 thale cress
Q9AY86   6 ASYR----GMKNVDS------------------------QQC------------------------------WEALIVCT 27  rice
Q9AY56 250 -GSNNDINVLNQSPLFIEAIKGEAPQIQFIVNGTQYNTGYYLADGIYPEWAAFVKSIRSPQLEKHKLFAREQEGKRKDIE 328 rice
Q9LDY0 240 -GTLNDINILDRSPIFDDILQGRAPNVKYKVNGREYHLAYYLTDGIYPKWATFIQSIRLPQNRKATLFATHQEADRKDVE 318 thale cress
Q9SH78  57 -STLNDINFLDRSPVFDDIEQGNTPRVNFFVYQRQYNMAYYLADGIYPSYPTFVKSIRLPQSEPDKLFVQLQEGCRKDIE 135 thale cress
Q9FYM5 167 -GSNNDINVLEASHLFANLAEGTAPPASYVINEKPYNMSYYLADGIYPKWSTLVQTIHDPRGPKKKLFAMKQEACRKDVE 245 thale cress
Q9AY86  28 gGSNNDINVLNQSPIFTDILMGTSTRLRYTVNGIQYDLGYYLADGIYPEWATIVKSIRHPQLEKHKLFAQQQESARKDAE 107 rice
Q9AY56 329 RAFGVLQARFNIVHRPARSWSQKVLRKIMQACVILHNMIVEDEGEMA 375 rice
Q9LDY0 319 RAFGVLQARFHIIKNPALVWDKEKIGNIMKACIILHNMIVEDERDGY 365 thale cress
Q9SH78 136 RAFGVLHARFKII------WNIADLAIIMRSCIILHNMIVENERDTY 176 thale cress
Q9FYM5 246 RAFGVLQSRFAIVAGPSRLWNKTVLHDIMTSCIIMHNMIIEDERDID 292 thale cress
Q9AY86 108 CAFGLLGARFKVVATTTHLWEQSDISNIMTACIIMYNMIVEDEGHLD 154 rice
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