Conserved Protein Domain Family
CTV_P23

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pfam04808: CTV_P23 
Citrus tristeza virus (CTV) P23 protein
This family consists of protein P23 from the citrus tristeza virus, which is a member of the Closteroviridae. CTV viruses produce more positive than negative RNA strands, and P23 controls this asymmetrical RNA accumulation. Amino acids 42-180 are essential for function and are thought to contain RNA-binding and zinc finger domains.
Statistics
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PSSM-Id: 113574
Aligned: 3 rows
Threshold Bit Score: -1
Created: 20-Apr-2021
Updated: 29-Sep-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q66245   1 MDNTSGQTFVSVNLSDESNTATTDVEPVSSEADRLDFLQKMNPIIIDALIRKNSYQGARFRARIIGVCVDCGRKHDKGLK 80  Citrus tristeza virus
Q9DJS8   1 MNDTSGQTFVSVNLSDESNTASTRVENVKSEADRLEFLRKMNPLIIDALVRKTNYQGARFRARIIGVCVDCGRKHDKALK 80  Citrus tristeza virus
Q66258   1 MDNPSGQTFISVNLSDESNTASTETKAVSSEADRLEFLRKMNPFIIDALIRKNSYQGARFRARIIGVCVDCGRKHDKASR 80  Citrus tristeza virus
Q9DJS8   1 MNDTSGQTFVSVNLSDESNTASTRVENVKSEADRLEFLRKMNPLIIDALVRKTNYQGARFRARIIGVCVDCGRKHDKALK 80  Citrus tristeza virus
Q66258   1 MDNPSGQTFISVNLSDESNTASTETKAVSSEADRLEFLRKMNPFIIDALIRKNSYQGARFRARIIGVCVDCGRKHDKASR 80  Citrus tristeza virus
Q66245  81 TERKCKVNNTQSQNEVAHMLMHDPVKYLNKRKARAFSNAEIFAIDLVMYTKERQLAIDLAAEREKTRLARRHPMRSPEET 160 Citrus tristeza virus
Q9DJS8  81 TERKCKVNNTQSQNEVAHMLMHDPVKYLNKRKARAFSNAEMFAIELVLYTKEKQLAVDLAAEREKTRLARRHPMRSPEET 160 Citrus tristeza virus
Q66258  81 TERKCKVNNTQSQNEVAHMLMHDPVKYLNKRKARAFSNAEMFAIDLVMHTKERQLAVDLAAEREKTRLARRHPMRSPEET 160 Citrus tristeza virus
Q9DJS8  81 TERKCKVNNTQSQNEVAHMLMHDPVKYLNKRKARAFSNAEMFAIELVLYTKEKQLAVDLAAEREKTRLARRHPMRSPEET 160 Citrus tristeza virus
Q66258  81 TERKCKVNNTQSQNEVAHMLMHDPVKYLNKRKARAFSNAEMFAIDLVMHTKERQLAVDLAAEREKTRLARRHPMRSPEET 160 Citrus tristeza virus
Q66245 161 PEYYKFGRTAKAMLPDINAVDVGDNEETSSEYPVSLSVSGGVLREHHFI 209 Citrus tristeza virus
Q9DJS8 161 PEHYKFGMTASAMLPELNAVGVGDNEDTSSEYPVSLSVSGGVLREHHFI 209 Citrus tristeza virus
Q66258 161 PEHYKFGMTAKAMLPNINAVDVGDNEDTSSEYPVSLSVSGGVLREHHLI 209 Citrus tristeza virus
Q9DJS8 161 PEHYKFGMTASAMLPELNAVGVGDNEDTSSEYPVSLSVSGGVLREHHFI 209 Citrus tristeza virus
Q66258 161 PEHYKFGMTAKAMLPNINAVDVGDNEDTSSEYPVSLSVSGGVLREHHLI 209 Citrus tristeza virus
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