4CPC


Conserved Protein Domain Family
Cor1
?
pfam04803: Cor1 
Click on image for an interactive view with Cn3D
Cor1/Xlr/Xmr conserved region
Cor1 is a component of the chromosome core in the meiotic prophase chromosomes. Xlr is a lymphoid cell specific protein. Xlm is abundantly transcribed in testis in a tissue-specific and developmentally regulated manner. The protein is located in the nuclei of spermatocytes, early in the prophase of the first meiotic division, and later becomes concentrated in the XY nuclear subregion where it is in particular associated with the axes of sex chromosomes.
Links
?
Statistics
?
PSSM-Id: 428132
Aligned: 39 rows
Threshold Bit Score: 94.989
Created: 26-Apr-2021
Updated: 29-Sep-2021
Structure
?
Program:
Drawing:
Aligned Rows:
Download Cn3D
PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection: 
4CPC_A         20 KALLAKRKRLEmyTKASLKTSNQKIEHVWKTQQDQRQKLNQEYSQQFLTLFQQWDLDMQKAEEQEEKILNMFRQQQKILQ 99   human
XP_016083420  268 KDLLDLMKKVElyVKASLPVSGLEIEQGGKTQQELRDEIKRYYSQEFLKIFQQCNETVQIFEELYNSVTEPFYQQNGF-- 345  platypus
XP_002591784 1371 KKKQHMKKQLDsfSRNTLKSTQKEVKGLWKGQMGRRMRVQEDFKGNLLHELDFLEKEMANLQACEEKALKFFENQQKLLS 1450 Florida lancelet
XP_003387517   77 KTIQNKKRKIEtfTKESLEYSKRKMKEVNTKQSADRQVVLNSYTKQVDVILGQWEEDLGKMKEGEEKLSLVMKQFQTQSR 156  Amphimedon qu...
XP_001635206   21 NTLNAKRKRIQsfSQASLKASSRKFDEVWRKQQNERSAQYEEFSKQVLLVLGQWEADLQKTREAEEKLESMYKQQQKLFN 100  starlet sea a...
3_pfamImport    1 KSVSLKRKKLEafTKQCC-AAADRFENVFEIQKRDRGALNEEYTKQVSSVIKQWEADIDKAKENEEKLTNLLTQQMKLIT 79  
XP_002125203   77 KSISSKRRKLEafTKQCC-AAREKLDSVLENQKKDRSTLNEEYKKQISSVINQWETDIDKAKENEEKLNNLLTQQMKLIT 155  vase tunicate
EDV21935       16 KSLNVKQKLLEefTLSSLSSSKKKVEETWIAHRRDRKELTENFEATVSNIMNSWKEEIQDSKRFEDKVHALLQQHQELLM 95   Trichoplax ad...
EKC40091       80 KTLVNKRKRLEqyTQNSLKSSTKKVEDIWKMQQTERQKLQDEYVRQVGTVFQQWESDLEKAKEQEEKLNQMFKQQQKMFQ 159  Pacific oyster
XP_002590403   89 KTLSAKRKRLEmfTHSAVKASNHKVENTWMAQHSERMKLSSEYQTQVQTVMNQWDSDIQKFKEQEEKLQNLFKQQQKLFQ 168  Florida lancelet

4CPC_A        100 QSRIVQSQRLKTIKQLYEQFIKSMEELEKNHDNLLTGAQNEFKK 143  human
XP_016083420  346 QPSSLDEEILEAFRQRYDQFTKAIEEMKRENEVILMNAQNDLEK 389  platypus
XP_002591784 1451 TARITHEQRFRKIMHMEEDFHKTLTQLDREQEQ----QQISLRE 1490 Florida lancelet
XP_003387517  157 QQRLAMLQKYKTMKQLKDEFAKSIDQLQETHDKQLSSIHDEMKE 200  Amphimedon queenslandica
XP_001635206  101 QQRIVQTQRLKRVQQLHEDYGKSLKELRKTHEDQQSSVQEQLRK 144  starlet sea anemone
3_pfamImport   80 QVRVVQTQRFKSIKQLHEQYMKSVGTVDETHSEQNRDVNKEIEK 123 
XP_002125203  156 QVRVVQTQRFKSIKQLHDQYIKSVGTVNETHSQQHKDVNKEIDK 199  vase tunicate
EDV21935       96 EVRNLHAKYLTHLHESCKMYVDSISSIDERYEKRLASAHCAIKK 139  Trichoplax adhaerens
EKC40091      160 QARVVQSQRLKTIKQLHDQFTKGIDELERCHHDQQSSVQSELKK 203  Pacific oyster
XP_002590403  169 QQRVIQSQRLKTLRQLHDQYTKGMDELEHCHQDQQGSMQVELRK 212  Florida lancelet
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap